Gene Oter_4148 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4148 
Symbol 
ID6208151 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5364396 
End bp5365676 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content69% 
IMG OID641693817 
Productextracellular solute-binding protein 
Protein accessionYP_001821022 
Protein GI182415956 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0472509 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.106363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCGCCTCC CGTTCCTGCC GTCGCTGCTG TTGCTTGTTT CGCTCTTCAG TTCACTCGCG 
CCGGCGGCGC CGGGCGGCCT GCACGCGCTG CGGGAATTGC GCGTCTGGTG CCATCAGGGC
CAGGAACAAG AAAACCTGGC GATGCGCGCG ATCGCCGCGG AGTTCAACCG CGCGCATGCG
GACCGCGGCA TTCATGCGAC GCTCACCTTT TTTCCCGACT ATCATTACAC CGAAAAGATT
GCGATCGCCG CCGCGGCGCA CGACCTACCC GACGTGCTCG ATCTCGATGG CCCGCTCGTA
GCGCGGTATG TCGACGCCGG TCTGCTCGCG CCGATCGACC ACTGGTTCTC CGTCGACGAA
CTCGCCGATT TTCTCCCGAC CCTCGTCGCG CAGGGCACGA TCGAGGGCCG GCTGTACGCG
CTCGGCGCGT TCGAGTCCGC CGTCGTACTC TACTACGATC GCGACACGTT CGCCCGCGCC
GGGGTGGAAG CTCCACCGCC CGGAGTCGCC TGGTCGTGGT CCGAGTTTCT CGCCGCGTGC
CAGCGGCTGC GCGATGCGGG GTTCGAACCG GTCGCGCTGC ACCTGGACGA GTCGGCCGAC
GAGTGGTTTA CCTATGCCTT CAGCCCACTG GTCTGGTCGG CCGGCGGGAA ATTGATCCAG
CAGCAGCGCG TGCGCGGCGT GCTGGATTCG CCCGCCGCCG TGCGTGCGCT CCAAGCGTGG
CAGCAGGTGT TCCGGCGCGG ATTCGCCGCC ACCGATCCGG TCAACCCGGA CCCGTTCGGC
AGCGGCGAGG TGGCGATGGA TTGGAGCGGA CATTGGATGG CGCGACGTCA CGTCGAGGCC
AAAGCCGATC GGCTCGGCGT GATGCCACTG CCGCGGATGG GCGATCACCC GGTCGCGCCG
TGTGGCAGCT GGTGTTGGGG AATCAGCGCG TCGGCGCGCG ATCCCGCGGC AGCCGCGCTC
TGGCTGCGGT GGATCACCGA CGCGCGGCAC GGGATCGAGC CGCTGGTCCG CGCGAATGGC
GCGGTGCCGG CGCGCCGCTC AGCCTTCGCC TTTTTCCCCG AATACGCGCA GCCACCCTAT
TCGCTGTTCC GCACGCAACT CGAACAATTT GCCCGCCCGC GGCCGCGTAC GCCGCATTAC
GCCACGCTCA CGCAGCGCTT CGCCGCGGCG CTGCGCGACA TCGCGCACGG CGCCGACGTC
GAGCCGCGGC TGCGCGCGGC GGCAGACGAG ATTCAATCGG TGATCAACCG GCGTATACAC
GCCCACGACA CATCCAAGTA G
 
Protein sequence
MRLPFLPSLL LLVSLFSSLA PAAPGGLHAL RELRVWCHQG QEQENLAMRA IAAEFNRAHA 
DRGIHATLTF FPDYHYTEKI AIAAAAHDLP DVLDLDGPLV ARYVDAGLLA PIDHWFSVDE
LADFLPTLVA QGTIEGRLYA LGAFESAVVL YYDRDTFARA GVEAPPPGVA WSWSEFLAAC
QRLRDAGFEP VALHLDESAD EWFTYAFSPL VWSAGGKLIQ QQRVRGVLDS PAAVRALQAW
QQVFRRGFAA TDPVNPDPFG SGEVAMDWSG HWMARRHVEA KADRLGVMPL PRMGDHPVAP
CGSWCWGISA SARDPAAAAL WLRWITDARH GIEPLVRANG AVPARRSAFA FFPEYAQPPY
SLFRTQLEQF ARPRPRTPHY ATLTQRFAAA LRDIAHGADV EPRLRAAADE IQSVINRRIH
AHDTSK