Gene Oter_4136 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4136 
Symbol 
ID6206727 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5350693 
End bp5351730 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content70% 
IMG OID641693805 
ProductYVTN beta-propeller repeat-containing protein 
Protein accessionYP_001821010 
Protein GI182415944 
COG category[S] Function unknown 
COG ID[COG3391] Uncharacterized conserved protein 
TIGRFAM ID[TIGR02276] 40-residue YVTN family beta-propeller repeat 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0910022 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.508786 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCCCGC GTCTTTTCCG CTTCGCTCTC GCGCTTCTGG CGACGCTGCC GGTAAGTGGC 
GCGGGCGGTG CCGCCCCGGA GCCGGCGCCG GGTTTCCGGA TCTACGTCAG CAACGAGCGC
AGCGGTGACG TCAGCGTGAT CGACGGCCAG ACGCTGCAGG TGGTGCAAAC CATCGCGGTC
GGCCAACGCC CCCGCGGACT GCATCTCTCG CCCGACGGAC AGACGCTCTA CGTCGCCACC
AGCGGCTCGC CCCGCCTGGG CCCGGGCGCG GACCCCGAAC GTGCGCAAAG CCAAACGGCG
GACAAATCCG CCGACGGCAT CGCGATCGTC GATCTCGCCA CCGGCCGGCG GGTCCGCCAG
CTGCACGTGG GCTCGGATCC CGAAGAGTTC GCGGTGTCAC GCGATGGCCG CCAGGTCATC
GTGGCCAATG AGGACATCGC CACCGTCTCG ATCTGGGAGA TCGAGAGCGG CCGCGAACTC
GCCCAGGCCT CGGTGTCGGC GGAGCCCGAG GGCGTCACCC TGCACCCGCA GCGCGATGAA
GTCTGGGTCA CGTGCGAGGA ACACGGCGAC ATTTTCATCC TCGATCTCGA ATCTGCCCGG
ATCCTCGGCC ACGTGCCGCT CGGCGGCCGG CCGCGCACGA TCACCTTTTC CCTGGCCGGC
GACCGCGCCT ACATCCCGCT CGAGAACGCC GGCGCCGTCG CGCTCGTCGA CGCGGATGTT
TATCACCCCG TGGACGCGGT GACGATCCCC GCACCCGCGC GACCGATGGG CTCCGCGATC
TCGCCCGATG GCGCACACGT CTACGTGACG ACCGGCCGCG GCAATCGCGT GGCCGTGCTC
GATCCGTCAA CGCGACGCCT CGTCGCAAAC ATTCCGGTGG GCGAGCGGCC GTGGGGCGTC
GCGCTCAGCC CGAGTGGCGC GCTGCTTTTC ACCGCCAACG GCGGCACGAA CGACGTCTCC
GTTGTCGACG TGCAGGCGGG GAAGGAGCTG CGGCGCATCA AGGTTGGCGA AGGCCCGTGG
GGCGTCGCGG TACGCTAA
 
Protein sequence
MTPRLFRFAL ALLATLPVSG AGGAAPEPAP GFRIYVSNER SGDVSVIDGQ TLQVVQTIAV 
GQRPRGLHLS PDGQTLYVAT SGSPRLGPGA DPERAQSQTA DKSADGIAIV DLATGRRVRQ
LHVGSDPEEF AVSRDGRQVI VANEDIATVS IWEIESGREL AQASVSAEPE GVTLHPQRDE
VWVTCEEHGD IFILDLESAR ILGHVPLGGR PRTITFSLAG DRAYIPLENA GAVALVDADV
YHPVDAVTIP APARPMGSAI SPDGAHVYVT TGRGNRVAVL DPSTRRLVAN IPVGERPWGV
ALSPSGALLF TANGGTNDVS VVDVQAGKEL RRIKVGEGPW GVAVR