| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4134 |
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| Symbol | |
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| ID | 6208359 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5347010 |
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| End bp | 5349145 |
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| Gene Length | 2136 bp |
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| Protein Length | 711 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693803 |
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| Product | multi-sensor hybrid histidine kinase |
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| Protein accession | YP_001821008 |
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| Protein GI | 182415942 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.734876 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.920735 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCTCCG ATTCCCCTCT GCGCAATCAC CGGATTCTCG TGGTGGATGA CAACACTTCG
ATCCACGCCG ATTTCCGCAA GATCCTCGGC GGCGGTCAGC CGACCGACGA AACCATCGCG
CGCGCGAAGA CGTTTTTCTT CGGCGACGAC GCGCCGCCCA GCGCCCTGGC GCCGTTCACG
ATCGACGTGG CGCTCCAAGG CAGCGAAGGT CTGCAAAAGG TGCAGCAAGC GCTGGCCGCC
GGCGAGCCCT ACGCGCTCGC CTTCGTCGAC ATCCGGATGC CGCCGGGCTG GGATGGCGTC
GAAACGATCG CGCGGCTCTG GCAGGAGCAG CCCGGTCTCC AGGTGGTCGT CTGCACGGCC
CATTCGGACT ATTCTTGGGC CGACATGATC CGGAAGCTGG GCGTTTCGGA CAACCTGCTC
GTGCTGAAAA AGCCCTTCGA CAACATCGAG GTGCTCCAGC TCGCTCATGC GCTCTGCGAA
AAGTGGAGCC TGCAGCAACA ACTGCAGATG CAACTCCGCG CGCTCGACGC CGAGGTGTCC
AATCGCACCG CGGAATTGCA GGCGACGAAC ACGCAGCTGC AGCGCGAGAT CGACGAACGC
CGGCAGGTGG AACAGGCGCT CCTCGTATCC GAGGAACGGT TCTCGAAAGC GTTCGAGGCC
AATCCCATTC CGCTCGCGCT GCTCAGCTAT CCCTCGCGGC GGCTCACGGC CGGCAACCAA
GGTTTCGCCA CGCTCACCGG CTACCGGCCG GACGAGTTCG TCGGCCGCAC GATCGCCGAG
CTTCAGCTCG ACGCCGATGC GAGCGGGCCC GACGTATGGC GGCAGGTCGA GTTCAACCAG
CCGGTCCGCA GCCGTCCCGC CCGCCTGCGC ACGAAAACCG GCGCGGTGCG GGATCTCCTG
CTGTCGCTGG AATTTCTCCA GGTGCAGAAC CAGCGCTGCC TGCTCGTGAT CGCGATTGAC
GTCACCGAGC AACTGGAGCT CGAACGCCAG CTGCGGCACT CGCAAAAAAT GGAGGCGATC
GGCGAGCTGG CTGCCGGGAT CGCCCACGAT TTCAACAACA TGTTGACCGT GATCCAGGGC
AACACGTCGA TCGTACGCGA ACGCCTCGAG CGCCACTCGC CGCACCACGA GCTGCTCGAA
ACCGTCGCGA GCGCGGCCGA GCGCTCGGCC AAGCTCGTCA ACCAGCTGCT CACGTTCAGC
CGCAAGCAGG TGCTCGAGGT GCAGCCGGTC GAGGCGGGCA AGTTGCTCGG CACGCTCCGC
GACATGCTCT CCCGCGTGAT CGGCGAGCAG ATCACCGTCC GCGTGCTGCC GCCCACCGCC
TCCCTCGCGA TCTCGGCCGA CGCCGGGATG ATCGAGCAGA TGCTGATGAA TCTGGCCATC
AACGCCCGCG ACGCCATGCC CGACGGCGGC ACGCTGACGA TCGGGGCGAC CGCGGTGAAC
ATCACGCCGG CGCACGCCGC GAGCAACCCG GAGGCGCGCC CCGGTTCGTT CCTGTGCTTC
TCCGTCGCCG ACAACGGCCA CGGGATCGCG CCGGAGGTCC TGCCGCGAAT CTTCGACCCG
TTCTTCACCA CGAAGCCCAC CGGCCAGGGC ACCGGCCTGG GGCTCGCCAC CGTGTACGGC
ATTATCAAAC AGCACGAGGG CTGGATCGAG GTGCAGTCCG CCATCGGCCA GGGCACGACG
TTCCGCGTTT TTCTGCCGCT GACCACCCTG CCCAGCGTCG AGCCGCCGCG CCCTGCGCCC
GTCGCCACGG CCGCGCGTTG CAGCGAGACG ATCCTGGTCG TCGAAGACGA GCCCGGGGTG
CGCATGTTTG TCACGCGACT GCTGGGTTCG CGAGGCTACA CCGTCCTCGC CGCCAGCGAC
GGCATCGAGG CGCTGGAGCA CTGGGCGCGC CACGGGCCGA GCATCGACCT GCTTCTCACC
GACGTGGTGA TGCCCGGCGG CATCACCGGT CATCAACTTG CCGCCACGCT CCTCCGCCAA
AAACCTTCGC TCAAGGTGAT CTTCACCAGC GGCTACAATC CGCAAACGGC GGGATCCAGC
CGGCCGCCGT CGCACAGTTA TCTCGCCAAG CCCTACGACG CGAGCGCGCT GCTGCAGGCC
TTGCGCGCAC AGCTCGACCA ACGATCTGTG CCCTGA
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| Protein sequence | MSSDSPLRNH RILVVDDNTS IHADFRKILG GGQPTDETIA RAKTFFFGDD APPSALAPFT
IDVALQGSEG LQKVQQALAA GEPYALAFVD IRMPPGWDGV ETIARLWQEQ PGLQVVVCTA
HSDYSWADMI RKLGVSDNLL VLKKPFDNIE VLQLAHALCE KWSLQQQLQM QLRALDAEVS
NRTAELQATN TQLQREIDER RQVEQALLVS EERFSKAFEA NPIPLALLSY PSRRLTAGNQ
GFATLTGYRP DEFVGRTIAE LQLDADASGP DVWRQVEFNQ PVRSRPARLR TKTGAVRDLL
LSLEFLQVQN QRCLLVIAID VTEQLELERQ LRHSQKMEAI GELAAGIAHD FNNMLTVIQG
NTSIVRERLE RHSPHHELLE TVASAAERSA KLVNQLLTFS RKQVLEVQPV EAGKLLGTLR
DMLSRVIGEQ ITVRVLPPTA SLAISADAGM IEQMLMNLAI NARDAMPDGG TLTIGATAVN
ITPAHAASNP EARPGSFLCF SVADNGHGIA PEVLPRIFDP FFTTKPTGQG TGLGLATVYG
IIKQHEGWIE VQSAIGQGTT FRVFLPLTTL PSVEPPRPAP VATAARCSET ILVVEDEPGV
RMFVTRLLGS RGYTVLAASD GIEALEHWAR HGPSIDLLLT DVVMPGGITG HQLAATLLRQ
KPSLKVIFTS GYNPQTAGSS RPPSHSYLAK PYDASALLQA LRAQLDQRSV P
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