| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4131 |
|---|
| Symbol | |
|---|
| ID | 6208747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5342768 |
|---|
| End bp | 5343793 |
|---|
| Gene Length | 1026 bp |
|---|
| Protein Length | 341 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641693800 |
|---|
| Product | ABC-type phosphate/phosphonate transport system periplasmic component-like protein |
|---|
| Protein accession | YP_001821005 |
|---|
| Protein GI | 182415939 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG3221] ABC-type phosphate/phosphonate transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACCCGC GTTCCGGCTT TTTGCGGCCG CTCAGCCCAG GCGGAGCTGC GCTCCTACCG
ACACTGCTGC TGCTGGTGGG CGTGGGCGTT TTGTTCGCTG CGTTGCCTCG CGCCGCGCGC
GCCGCCCCTT CCGCGACCTC GACTGCGGAG GAACCCCCGC CGCTGCGCGT GGCGCTCTTG
CAGCGGATGT TTGTCGAGGT GAATGAAAAC GATGCCCGCG CCGCCATGCT CGCGTGGGCG
AAAACGATGG GCCGCGAACG CGGCATCCCG GTGGTGTTGG AGCCGAATTT CCTCACCAGC
ATCGAGGAGG TGCGCCTGGC TTTCCGGCGC GGCACCATCG ACGCCGTCAC CCTGCCGGCC
GACGACTATT GGGCGCTGCG GCCGGACAAG CCGGAAGGAC CTTTCATCGC CGGCGCGGTG
GACGGCAGCA TCGAGGAAGA ATATGTGCTG GTCGTGCGGA AAGACCGCGG GCTCGACTCG
TTGCCCCAGC TCCGCGGCCG CTCGCTGACC GTTTACGACA ACCCTCGTGC GTGTCTGGCT
CCGATCTGGC TCGAGACGTT GCTTCTCGAG CTCAATGGCG AACGGATCCC GGAGTTTTTC
GGACGCGTCG CGCACAATCC CCGGCTTTCC CGCGTGGTGC TGCCGGTGTT CTTCGGTCAA
TCCGATGCGG CGCTCGTCAC GCTGCGCGGG TTCCGGTTGA TGAGTGAGCT CAACCCGCAG
GTCGGCGAGC AGCTCGTGGT GCTGGCCGTT TCTCCGCCCG TGCTGCCCGT CGTGTTCTGC
TTCCGCCCGG GCTTCACGTC ACCTTACCGC GCCAAGCTGC TCCAGGCCGT GAACACGTTT
CACCAAACCT CCGCCGGGCA GCAGACCCTC ACGTTGTTTC AAACGGACCG GCTGATCGAA
TGCCCGGTTG AAGCCATCGC CGGCGCCTGC GCCATGCTCG ACCGCCACGA GCAACTCCGG
CTCGCCCACC CTCCGCGTAC GATGTCGGTC CAAGCCGCGC CGACGGCCGG CCCGCCACGC
CCCTGA
|
|---|
| Protein sequence | MNPRSGFLRP LSPGGAALLP TLLLLVGVGV LFAALPRAAR AAPSATSTAE EPPPLRVALL
QRMFVEVNEN DARAAMLAWA KTMGRERGIP VVLEPNFLTS IEEVRLAFRR GTIDAVTLPA
DDYWALRPDK PEGPFIAGAV DGSIEEEYVL VVRKDRGLDS LPQLRGRSLT VYDNPRACLA
PIWLETLLLE LNGERIPEFF GRVAHNPRLS RVVLPVFFGQ SDAALVTLRG FRLMSELNPQ
VGEQLVVLAV SPPVLPVVFC FRPGFTSPYR AKLLQAVNTF HQTSAGQQTL TLFQTDRLIE
CPVEAIAGAC AMLDRHEQLR LAHPPRTMSV QAAPTAGPPR P
|
|---|
| |