Gene Oter_4118 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4118 
Symbol 
ID6204230 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5330862 
End bp5331938 
Gene Length1077 bp 
Protein Length358 aa 
Translation table11 
GC content67% 
IMG OID641693786 
ProductNADH dehydrogenase (quinone) 
Protein accessionYP_001820992 
Protein GI182415926 
COG category[C] Energy production and conversion 
COG ID[COG3261] Ni,Fe-hydrogenase III large subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.433928 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCCGCA CGATCATTCC TTTCGGTCCG CAACATCCCG TGCTCCCCGA GCCGGTGCAC 
CTGGATCTCG TGGTGGAAGA CGAGCGGGTC GTGGAAGCGC GGCCGTCGAT CGGATTCATC
CATCGCGGGC TCGAACGCCT CGTCGAAAAA AAGGACTTCG TCGAGTTTGT GTACGTCGCC
GAGCGGATCT GCGGAATCTG CAGCTTCATC CACGGCCAGA CCTACTGCCA GGGCATCGAG
GAGATCATGC GTATCGCCGT GCCGCCGCGC GCCCGTTACC TACGCACGAT CTGGGGCGAG
TTCTCGCGGC TGCACAGCCA TCTGCTCTGG CTCGGGCTCA TGGCGGATGC GATCGGGTTC
GAGAACCTGT TCATGCATTC GTGGCGCGTG CGCGAGCAGG TGCTGAAGAT CATCGAAGCC
ACGACCGGCG GCCGCGTGAT CTTCGGCGTG TGCAAGATCG GCGGCGTCCG TCGCGACATC
CCCGCCGACG CCATTCCCGG CATCCTCGAC GAACTCACCG CGATCGAGGC GGGCATGCGC
CGGCTCGCGG ACACGTTTCT CCGCGACCGC TCGGTACAGG ATCGGTTGCG CGGCGTCGGC
GTGCTCTCGC GCGATGACGC GCACGCGCTC GGCTGCGTCG GACCGACCCT GCGCGCGAGC
GGCGTCGCGC AGGATATGCG CCATCTCGGC TATGCCGCGT TCGGCGAACT GCCCGTCGAG
CCGGTCACGC GGCTCGACGG GGACTCCTAC GCGCGCTGTG CCGTGCGTTG CGAGGAGTTG
TTCCAGTCGG TCGACCTGAT CCGGCGCGCC TTCGCCGCGC TCCCCGCCGG CGAGATCGCG
GTCAAGGTCA CGGGCAATCC CAGCGGCGAA TTCATCGCTC GCACCGAACA ACCGCGCGGC
GAAGTCGTCT ATCACCTCAA GGCGGATGGC AGCCGAAACC TGCAGCGGTT CCGCGTGCGC
ACGCCCACCT TCGCGAACTT GCCCGCGATG GTGAAACTCC TCCCAGGCTG CGAACTCGCC
GATGTGCCGG TCCTCGTGCT GACCATCGAC CCCTGCATCA GCTGCACGGA GCGTTGA
 
Protein sequence
MARTIIPFGP QHPVLPEPVH LDLVVEDERV VEARPSIGFI HRGLERLVEK KDFVEFVYVA 
ERICGICSFI HGQTYCQGIE EIMRIAVPPR ARYLRTIWGE FSRLHSHLLW LGLMADAIGF
ENLFMHSWRV REQVLKIIEA TTGGRVIFGV CKIGGVRRDI PADAIPGILD ELTAIEAGMR
RLADTFLRDR SVQDRLRGVG VLSRDDAHAL GCVGPTLRAS GVAQDMRHLG YAAFGELPVE
PVTRLDGDSY ARCAVRCEEL FQSVDLIRRA FAALPAGEIA VKVTGNPSGE FIARTEQPRG
EVVYHLKADG SRNLQRFRVR TPTFANLPAM VKLLPGCELA DVPVLVLTID PCISCTER