Gene Oter_4109 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4109 
Symbol 
ID6205221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5321576 
End bp5322631 
Gene Length1056 bp 
Protein Length351 aa 
Translation table11 
GC content68% 
IMG OID641693777 
Product6-phosphogluconolactonase 
Protein accessionYP_001820983 
Protein GI182415917 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2706] 3-carboxymuconate cyclase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACTC ATCATCTTTT CATCGGTCCC TACACCCGCG ACGGCAGCAA GGGCATCTAC 
GCGCTGCAAC TCGACGCCGC GACCGGCCGG CTGTCCGATG CCGTGCTCGC CGCCGAAACG
CGCAACCCTT CCTACCTCAC CCTCGCGGTG GATCGCCGAA CACTTTACGC CGTGAGCGAG
TCCGACGCCA TGGCCGCCGC CTTCGCCGTC GGCGATGACC GGGTTCATCT CACCGCGCTG
GCTGCCACGC AGGCGGCAGG CGGCAAGGCG CCCTGTCACC TCGCGGTCGA TCGCACCGGC
CGCGCGCTGC TGGTCGCCAA TTATCACACC GGCGTCGTCG CTTCGCTGCC GATCAACCCC
GACGGATCGT TGCGCCCGCC AGCGAGCATA ATCCATCACA CCGGCTCCAG CGTGCATCTC
GAGCGTCAGG CGACGGCTCA CGCACACTGC GTCACGCTCT CGCCGGACAA TCGCTTCGTC
TTCGTGTGCG ATCTCGGGCT GGACAAGATC TTCATCTACC GACTCGACCC GGGTTCCGCC
CAGCTCTCGC CCGCCGAGCC GCCATTTCTG CCCACTCCCG CCGGCTCCGG TCCGCGCCAT
CTCACGTTCG CGCCGGATGG ACGACACGCC TTCCTCGTGA CCGAGTTGGG CGGCACGCTC
ATCGCGTACC GTTACGATGC GGCGCATGGC ACACTCACGG CGACCGACCA AAAATCCACG
CTCGCGCCTG ACTATCGCGG CGAAAACACC TCCGCGGCGG TGCGCGTGCA CCCGCTCGGC
CGCTTTGTCT ACGCGTCGAA CCGCGGTCCC GACAATATCG CGGTATTCGC CTTCGACGAG
GCCAGCGAAC GGCTCGCGCT GGTCGAACTC GTGCCGAGCG GCGGGCAGGG TCCGCGCGAT
TTCGCGCTCT CGCCCGACGG CCAGTGGCTC GTCGCCGCCC ACCAGTTTTC GGATGTGATC
ACCGTGTTCC GCGTGGACCG CTCGACGGGA CGGCTCACGC CTACGCCGCA CCGCGCTCGC
GTCTCCACGC CGGTGTGCGT GCTGTTCCTC GACTGA
 
Protein sequence
MSTHHLFIGP YTRDGSKGIY ALQLDAATGR LSDAVLAAET RNPSYLTLAV DRRTLYAVSE 
SDAMAAAFAV GDDRVHLTAL AATQAAGGKA PCHLAVDRTG RALLVANYHT GVVASLPINP
DGSLRPPASI IHHTGSSVHL ERQATAHAHC VTLSPDNRFV FVCDLGLDKI FIYRLDPGSA
QLSPAEPPFL PTPAGSGPRH LTFAPDGRHA FLVTELGGTL IAYRYDAAHG TLTATDQKST
LAPDYRGENT SAAVRVHPLG RFVYASNRGP DNIAVFAFDE ASERLALVEL VPSGGQGPRD
FALSPDGQWL VAAHQFSDVI TVFRVDRSTG RLTPTPHRAR VSTPVCVLFL D