Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4091 |
Symbol | |
ID | 6204616 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5300765 |
End bp | 5301928 |
Gene Length | 1164 bp |
Protein Length | 387 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641693759 |
Product | ABC-type nitrate/sulfonate/bicarbonate transport systems periplasmic components-like protein |
Protein accession | YP_001820965 |
Protein GI | 182415899 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0715] ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00248715 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.783031 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCGCGA GACAGATGCG GACTTCCTTT CCAACCTGTT ACCGTGTTCC ACTCGTCGCG CTCCGCGTCC CACCGCATGC TGGCATCGTG AATCCCGCTT CACGTCTCGC CGGCGCAGGC CGGCCCGCTC TGCTGCTCGC GCTCGGCGTT CTGGCGCTGG CGCTCCACCC AGCGGTCGCG CGACCGTTGC GCGTAGCCTA CACGCACTCG TTCGTCTGCG TTCCGCTGGG CATCGCCGAA ATGCAGGGCT TCTGGCAGGA GGCCGGACTC CAGGTCGAAT TGCGCGGATA CCAGACCAGC GTCGAGGTGG TGTCGGCGCT CCGCTCGGCG GAGGTGGATC TCGCTTTCGA CCAGATCGCG ACTTGGGTCG ACGAAGCGGA GGCCGGAACG CCGCTGGTGA TTCTCGGTGA AACCGACTGG TCGCTCGGCG GCGACAAGCT CCTGCTGCGT GACGGCGCCG ATCTGCGCAA TCTCCGCGGC CGGCCCATTG CCGTCTGCCT GCGCGGCAGC GGGCAAATGC TGTTCCTGCG CGAGGCGCTC AACCGCGCGA ATCTGAGTCT TTCCGAATTT CCGCTCGCCG AGGTGCCCGA ACAGGAGAAA GCGCTGCAGT TGTTCGCAGA GGGAAAGCTC CACGCGGTCG TCTGCAACGA TCCCTGGGCT TCCCGGCTCG AGCGTTCTGG AGCCCACACG CTGGCCACCA CCGCGGACAT TCCCGGCATC GCCCCGGAAG GCTTCGCCGC CCGTCGCGGG CAGGTGGACG ACGCCACGTT GCAGCGTTTC TTCGCCGTCT GGTTCCGCGC TGTCGCGTTC CTGCACGATC CGGCAAACGC CGGTGTCGTC GCCGAAACCG CCTCCGTTTA TTCGTTCGCG GGCAGCGAGA CCATCACCGC GGCCGATGTC GAGCGCTACG CGAGAACAAT GCCCGTGCAC GACGCCGCCA CCTCGCTGCG CCAGAACGAT CTCGAGTCCG GCAACGTCCG CCAGCTGATC CAACGGCTCC GCGTGCTCCT GCGGTTGCAA GGCCGGCAAG TCACCGAGTC GGACCTCGCC GCTCACTTTC ACCTCGAGCC GGTGCGGGCG ACCGCGAGGT CGACCGCCGA CGCCGGGACC ATCGCTGCCG GCGCCGGGAC TTCTCGGAGT TCCCCACTCG TCACCGACCG GTAA
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Protein sequence | MAARQMRTSF PTCYRVPLVA LRVPPHAGIV NPASRLAGAG RPALLLALGV LALALHPAVA RPLRVAYTHS FVCVPLGIAE MQGFWQEAGL QVELRGYQTS VEVVSALRSA EVDLAFDQIA TWVDEAEAGT PLVILGETDW SLGGDKLLLR DGADLRNLRG RPIAVCLRGS GQMLFLREAL NRANLSLSEF PLAEVPEQEK ALQLFAEGKL HAVVCNDPWA SRLERSGAHT LATTADIPGI APEGFAARRG QVDDATLQRF FAVWFRAVAF LHDPANAGVV AETASVYSFA GSETITAADV ERYARTMPVH DAATSLRQND LESGNVRQLI QRLRVLLRLQ GRQVTESDLA AHFHLEPVRA TARSTADAGT IAAGAGTSRS SPLVTDR
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