Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_4081 |
Symbol | |
ID | 6204258 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | + |
Start bp | 5285643 |
End bp | 5286350 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641693749 |
Product | hypothetical protein |
Protein accession | YP_001820955 |
Protein GI | 182415889 |
COG category | [S] Function unknown |
COG ID | [COG2836] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.691294 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATCTCG CCGCGATCAA CTCTCCCGCC ACCGCCCTCG TCGCCGGACT CGTCACGAGC CTGCATTGCG CCGGCATGTG CGGCCCGCTG GCGTGCGCGC TGATGCCGGT CCGCAGCTCG ACGGGTCAGC CCGGAGCGGA TCCATCGACC GTCAGCACCA CGTATCATCT CGCGCGACTG ACCAGCTACA CGCTGCTGGG GGCGGTTGCC GGCGGACTCG GCGGACTGCC GCTCAGCTTC GTCTCGAGTT CGGCGCTGCG GTGGGCGCCC TGGGTGCTGG TCGCATTCTT CCTCGCGATG GCTTTTCGGC TCGATCGGCT GCTGCCGAAG CCGGCGTTTC TCGGCCGGTT CTCGCTGCAC CTCGGCCGCT GGACTCAGGG GCGCTCGCGG GTGCAGGCCG CCGCTGCCGT GGGCTTCGCC ACGCCGCTGC TGCCTTGTGG CCCGCTCTAT TTCGTCATCG CGCTCGCGTT GATGACCGGC TCGGCATTGC GCGGCATCGA GTTCATGCTC GCGTTCGGAC TCGGCACCGT GCCGCTGCTC TGGCTCGCGC AGTCACAATT CCAATGGGTG CGCCAAAAAC TTTCGCCGCT GTGGCTCAAC CGCGTCCGGA TCTCGCTCGC GCTGATCACC GCCGTCACCC TCAGCTGGCG CTTGCGCGGT ACGCTCGGGT TCGCCGGGCC CGATCCGGCG AACTTCATCT GCCATTGA
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Protein sequence | MDLAAINSPA TALVAGLVTS LHCAGMCGPL ACALMPVRSS TGQPGADPST VSTTYHLARL TSYTLLGAVA GGLGGLPLSF VSSSALRWAP WVLVAFFLAM AFRLDRLLPK PAFLGRFSLH LGRWTQGRSR VQAAAAVGFA TPLLPCGPLY FVIALALMTG SALRGIEFML AFGLGTVPLL WLAQSQFQWV RQKLSPLWLN RVRISLALIT AVTLSWRLRG TLGFAGPDPA NFICH
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