| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4070 |
|---|
| Symbol | |
|---|
| ID | 6204508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5273330 |
|---|
| End bp | 5275252 |
|---|
| Gene Length | 1923 bp |
|---|
| Protein Length | 640 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 641693738 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001820944 |
|---|
| Protein GI | 182415878 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.448467 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTCGAC CCTCGCTCTC ACTCCTGCTC GGGCTCTCGC TGGCGACGCT CGCCGGCGGC
GTCGAGCGCG CAACCTACAA CAGCGCCGGC GCGCTCACCG CGCTGATCTG CGATGGCGCG
GAAGTCCCGG TCCGCGGCGA GTTCGTGGTC GAGTTCGGCC AGGGCGTGCG CAGTTCTCTG
CAACCGCACG ACCAGCGTTC GCCGATCTGG CGCGAAGGCC GTGAGCTGCG CTGGCGCGGC
GTGTCGACGT TCGCGAACAG CAGCCAGGCT CAGTTTGCCG CCGCGTGGAC GGAAGCGGAG
GACGGCGTCG CGCTGGTCGG CTCCGCTACC GCCGGAGGCC CGCCGCCCGC GGGCGCGCCC
GCGGCGGCGA CGCGCGCATG GCCGCTCTTG GTGGAATCGG TCGACTACGT GATCGATCTG
CCGCGCACGC TGTTCGCCGG CGGCCGGATC GACGGCACCT CGGCCGCGCT CGCCACCACC
CGCCCATCGA ATCCGCAGTT TTTTCAAGCG ACCGTGGACC GGCTCGCGTT CGTCGACGCG
CAGCAGAACT GGCGGCTCGA ACTCCAGCTC GATCAACCGC GAGCGGTCAC CGTGTCCGAC
CGTTGGGAGA ACGACGACCG CTCGTATCGC GTGCGGATCC GGCTCGGCGG CGGGCTCTGG
CCGCACGGTG AGTCGTTCAA GCTCGCCGTG AACTTCAAGC TTTCCGGTCG TGCCCATGCG
TCCCTCGCGC ACGTGACGAT CGATCCACAC ACGCCGCGCT ATCCGTTCGA CGGGTTCGGC
GGAAACTTCT GTTTCAACAC CCAGACGCCG GTCGCGGACT ACCTGCTGGA GAATCTCGAG
CACGCGTGGG CGCGCTTCGA ACTCAAGGGC GTGGCTTGGG ATCGCGAGCG CGACCAGCCC
GGGCCACAAC TGGTGCGCGA CTTCGAGCTG ATGCAGCGCG TGCAACGGAT GGGGCTGCCG
TGGATCATCA GCCTTTGGCG GCTGCCCGAG CGCTACTACA GCGATCCGAA TCAGAAGCCG
GCGGGCACGT TTCATCGCAA GATCGCGGAC GCACGCTGGC CCGAATTTCT CGATCTGATC
GGAAGCTATC TGCTCCACCT GAAGAAAAAC TACGGCGCCG AGCCCGACAT GTTTTCCTTC
AACGAGCCCG ACCTCGGGGT CGACATCGGG TTCAACGGAC CCGAGCACCG CGACATGATC
AAGCGCATCG GCGCGCATCT CGAGTCGCTC GGCCTGAAGA CGCGGCTGCT GCTCGGCGAC
ACGGCCAACC CGCGCGATTC GCACAAATAC GTGCTGCCGA CCGCGGCTGA TCCAGCGGCG
ATGCGCTACG TCCGCGCGCT ATCGTTTCAT AGCTGGGGCA ACGGCACGCC GCAACAGTAT
CGCGCCTGGG GAGACGTAGC CGACTGGACG CAGCTCCCGC TGCTCGTCGG GGAAGCCGGC
GTGGATCCCG GCTCCTGGCG CAACCGGATG TTCGACAGCT ATGCCTACGG TCTCCGAGAG
GCGCGCCAGT ATCAGGAACT CCTGCGCGAC ACCCGGCCGC AAACCCTGCT CTTTTGGGAA
TACACCGAAG ACTATGGGGT CGTCCGCGTG GGCGACGACC AGCGCCTCGA GCCGACTGGC
CGCTTCTATT TTTTGAAGCA TTTCAGCAAT CTCTCGCCGC GCCACGGCCA GGTGGTCGCC
AGCTCCAGCG ACCAGCCCGA CGTACTGGTC AGCGCGTTCG CGAAAGGCGA CGTGCTCGTC
GTTCATCTCG TGAACACCGG TCCGGCGTGC GAGGCTCAGC TCGCCGGATT GCCTGCCGGC
CCGTGGCGGC AGATCGTCAC CACGGAAACC GAGGGTTTCA AAGAGGCCCC CGCGCCTACA
CTCGACGCAC CGTTGGCGTT GCCGGCGCGC AGTTTCACCA CGCTCGTGCG CAGCCCGCGG
TAG
|
|---|
| Protein sequence | MIRPSLSLLL GLSLATLAGG VERATYNSAG ALTALICDGA EVPVRGEFVV EFGQGVRSSL
QPHDQRSPIW REGRELRWRG VSTFANSSQA QFAAAWTEAE DGVALVGSAT AGGPPPAGAP
AAATRAWPLL VESVDYVIDL PRTLFAGGRI DGTSAALATT RPSNPQFFQA TVDRLAFVDA
QQNWRLELQL DQPRAVTVSD RWENDDRSYR VRIRLGGGLW PHGESFKLAV NFKLSGRAHA
SLAHVTIDPH TPRYPFDGFG GNFCFNTQTP VADYLLENLE HAWARFELKG VAWDRERDQP
GPQLVRDFEL MQRVQRMGLP WIISLWRLPE RYYSDPNQKP AGTFHRKIAD ARWPEFLDLI
GSYLLHLKKN YGAEPDMFSF NEPDLGVDIG FNGPEHRDMI KRIGAHLESL GLKTRLLLGD
TANPRDSHKY VLPTAADPAA MRYVRALSFH SWGNGTPQQY RAWGDVADWT QLPLLVGEAG
VDPGSWRNRM FDSYAYGLRE ARQYQELLRD TRPQTLLFWE YTEDYGVVRV GDDQRLEPTG
RFYFLKHFSN LSPRHGQVVA SSSDQPDVLV SAFAKGDVLV VHLVNTGPAC EAQLAGLPAG
PWRQIVTTET EGFKEAPAPT LDAPLALPAR SFTTLVRSPR
|
|---|
| |