| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4059 |
|---|
| Symbol | |
|---|
| ID | 6204591 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5262406 |
|---|
| End bp | 5262798 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 641693727 |
|---|
| Product | thioredoxin domain-containing protein |
|---|
| Protein accession | YP_001820933 |
|---|
| Protein GI | 182415867 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG3118] Thioredoxin domain-containing protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.653805 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGAATCG CCCTGTTGAT GTTCACGCTC CTCTGCGGTG CCGCGCTGCT GCACGCCGAA
GAAACGAAGC CGGCGCCCGC GCCACCGGCT TTGCCCCGGC TCCTCGACCT CGGCGCGGGA
AAATGCATTC CGTGCAAACG CATGAAGCCG ATCCTCGCCG AGCTCACGCG CGAGTATGCG
GACCAGTTCA CCGTGGTCTT CATCGACGTG TGGGAAGACA ACGCGGCGGC AGAGCCTTAT
GGCATCCGGC TGATCCCGAC ACAGATCTTC TACGCGGCGG ACGGCCAGGA GCTGTTTCGC
CACGAGGGGT TTTATGGGAA GAAGGAGATT CTGGCGAAGT GGCGAGAACT CGGCGTCGCG
TTGAAGGAAC CCGCAACCGC GAAGAACGAA TAA
|
|---|
| Protein sequence | MRIALLMFTL LCGAALLHAE ETKPAPAPPA LPRLLDLGAG KCIPCKRMKP ILAELTREYA
DQFTVVFIDV WEDNAAAEPY GIRLIPTQIF YAADGQELFR HEGFYGKKEI LAKWRELGVA
LKEPATAKNE
|
|---|
| |