| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4058 |
|---|
| Symbol | |
|---|
| ID | 6204597 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5261706 |
|---|
| End bp | 5262401 |
|---|
| Gene Length | 696 bp |
|---|
| Protein Length | 231 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641693726 |
|---|
| Product | cytochrome c biogenesis protein transmembrane region |
|---|
| Protein accession | YP_001820932 |
|---|
| Protein GI | 182415866 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0785] Cytochrome c biogenesis protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.477515 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGACGCAC TGTTCGTCTG GTTGAGCGAC GCGATGACCG GTGCGCCGTG GCTCGCGGTC
GTCGCGGCGG CGGGGTGGGG CATGGCCAGC CTTGTGCTCA GCCCGTGTCA CCTGGCCAGC
ATTCCGCTCG TGGTGGGATT TATCGCGCAG CGGGACGAGA CCCTGCCGCG CCAGGCGCTT
GGCGTCGCGT TGCTCTTCGC GCTCGGAATT CTCGTCTCGA TCGCGGCGAT CGGCGGCGTC
ACGGCTGCGG CCGGAAGAAT GTTGGGCGAT ATCGGTCCGT GGACCGGCTA CCTCGTCGCT
GCGGTGCTGG TGGCGGTGGG GCTGCATCTC CTCGGGTGGC TGAAGCTGCC GTGGGAACGG
ACGATGGCCC TGCCGCGCTA CCAGGGCCCG GCCGCGGCCT TCCTGCTCGG GCTGGTTTTC
GGTCTCGCCC TGGGACCGTG CACCTTCGCC TACCTCGCGC CCGTGCTGGG CGTGGTTTTT
GGCGTGGCCC GCGCGCAGCC GCTCTTTGCC GCGCTGCTGG TGCTGGCCTA CGGCCTCGGT
CACTGCGTGT TGATCGTCGC CGCCGGCGTG TTCACCCAGA AGGTTCAACG CGTCCTCGAC
TGGCATGGAG CCTCACGCGG TGCGGTCTGG TTACGCCGCA GCAGCGGCGT GCTGGTGCTG
GTGGGCGCGA CGTGGCTGGT CTATTCCGCC GGATGA
|
|---|
| Protein sequence | MDALFVWLSD AMTGAPWLAV VAAAGWGMAS LVLSPCHLAS IPLVVGFIAQ RDETLPRQAL
GVALLFALGI LVSIAAIGGV TAAAGRMLGD IGPWTGYLVA AVLVAVGLHL LGWLKLPWER
TMALPRYQGP AAAFLLGLVF GLALGPCTFA YLAPVLGVVF GVARAQPLFA ALLVLAYGLG
HCVLIVAAGV FTQKVQRVLD WHGASRGAVW LRRSSGVLVL VGATWLVYSA G
|
|---|
| |