| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4057 |
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| Symbol | |
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| ID | 6204601 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5260555 |
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| End bp | 5261709 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693725 |
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| Product | ECF subfamily RNA polymerase sigma-24 factor |
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| Protein accession | YP_001820931 |
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| Protein GI | 182415865 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR00778] alkylhydroperoxidase AhpD family core domain
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.46169 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGCGCGG ACGTTTCCAC TCGCGGTCAT GACGATTTCA CCCGGCTGTG GGCCGCGCAT
CGCGACGCCG TGCGCCAACT CTTGACCCGG CTGGCACCGG CCGCCGAGAT CGACGATCTG
CTCCAGGAAA CTTTCGTGAA AGCAGCGCGC GCGCTGGCTT CGTTTCGCGG CGAGTCCGAG
ATCGGCACGT GGTTGCATCA GATCGCGCAC CGTACGGTGC TCGATCATCT GCGCAGCCGG
CGGCATCATG AAGCGCAGCG AACGGAATCG CTGACCAAAG AGGACCGCGA GGAAACGGGC
GCATCGGCTC CGCCGGAGGC GTTGGTGGCG CAGGCCGAAG CTTCGAGCCG GCTCGAGCAG
CAGGAAATGC ACGGCTGCAT CCGCGAATAT GTGGACCGGC TCGCGCCCTC GCATCGCGAA
GTGATCGCGC TCAAGGATCT CGAAGGGCTG ACCAACCTCG AAATCGCCGC GGGGCTGGGG
ATCAGTGTCG CCGCGGCAAA AATCCGACTG CATCGCGCGC GCATCGCGCT CCGGGGACTG
CTCGCGGAAG GTTGCGAGTT TTACCAAAGC GATACCGGCA CGCTCGCCTG CGATCGACGC
CGGGAGGAAC CGCCTGTATC TCCGTCCCTC GCGATTCCGT CCAAGGAACC ACAGCCCGAT
CTTGTCGCAG GTCGCGACGA GCCGCCCGGG CGAAACTCAA ACGATCAAAC GATCATGTCT
GTGGTCTCCT CCTCCTGCTG TTCCACTCCT CAACCTGGCG TGCCGGCCAT GCCCGCCGCG
ATGTCCTCCT GCTGCGCCAC GCCGTCAGCT GCCGCTTCGG GCATCCCGGC CGCGATGTCC
TCGTGTTTTG CCGATCCGCG CGCGACGGCG TCGGCGACGC CCACGCCCAG CCTCTACAAC
GCGGTCACCG CCGAGTTCGT GGCCATCGGG GCGGCGATCG GCGCCAACTG CGAACCGTGC
CTGCGCCATC ATACGCGTGA AGCGATGAAG CTGGGCATTT CCGCGGCGGA CATTGCCAAA
GCGGTCGCGT TCGCCGCCAC GGTGAAGGAA ACACCGGCGC GCAACATCCT GAAGCTCGCC
GAACGACTCA CCCAGGAAGG TGGCGAGGCC AATGCGACCG GGCCGAGTGC GAGCGGCTGC
GGCTGTTCCG CCTGA
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| Protein sequence | MSADVSTRGH DDFTRLWAAH RDAVRQLLTR LAPAAEIDDL LQETFVKAAR ALASFRGESE
IGTWLHQIAH RTVLDHLRSR RHHEAQRTES LTKEDREETG ASAPPEALVA QAEASSRLEQ
QEMHGCIREY VDRLAPSHRE VIALKDLEGL TNLEIAAGLG ISVAAAKIRL HRARIALRGL
LAEGCEFYQS DTGTLACDRR REEPPVSPSL AIPSKEPQPD LVAGRDEPPG RNSNDQTIMS
VVSSSCCSTP QPGVPAMPAA MSSCCATPSA AASGIPAAMS SCFADPRATA SATPTPSLYN
AVTAEFVAIG AAIGANCEPC LRHHTREAMK LGISAADIAK AVAFAATVKE TPARNILKLA
ERLTQEGGEA NATGPSASGC GCSA
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