| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4032 |
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| Symbol | |
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| ID | 6204973 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5232013 |
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| End bp | 5233863 |
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| Gene Length | 1851 bp |
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| Protein Length | 616 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641693700 |
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| Product | GreA/GreB family elongation factor |
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| Protein accession | YP_001820906 |
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| Protein GI | 182415840 |
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| COG category | [K] Transcription |
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| COG ID | [COG0782] Transcription elongation factor |
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| TIGRFAM ID | [TIGR01462] transcription elongation factor GreA |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0362569 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATTCTG AAGCTGTTTC CGCGCTCATT GCCAAAAACC CGCCGCTCAA AGCGGCCAAA
GCTCAGTTGG AGGCCATGGA GCCGGGCGCT TATGTGATCC ACCGCAGCTG GGGGTTTGGC
CGGATCAAGG ATTATGACGA GGCGGCGCAG CGGCTGATCA TCGATTTCAA GAACAAGAAG
GGCCATGCGA TGGATCCGGC CTTTTGCCTG ACAACCATGG AAATCCTTCC GGCCAACCAC
CTGCTGGTCC GCAAGGAAAC CGATCCGAAG CAGGTTGCCG AGTTGATCGC CGAAAACCCC
GTCCAGCTCG TCGTCGAAAC GCTGCAGACC TACGACAATC ACGCCACCAC CGCGATCGAC
CTGGAGATCA CGCTCGGCCA GGTAATCGGC GAGGATAAGT TCAAAAAGTG GTGGGCCGCG
ACCAAGAAGG CGCTCGCCAA GGACCCGCGC ATCTCCGTTC CGCAGAAAAA AACCGAGTGC
TACGTCCTAC GTGAGACTCC CGTTTCGGCC GAAGACGAGA TTCTCGAGCA GTTCAACTCG
ACGCGGTCGG CGCGCCGCCG AATCACCCTG GCCGAGGAGC TGATCGAGGC CATAGGCAAG
AAGGAGATCA ACACCGATCT CTCCGTGGTC CTGACCGGCG TCGCCGAGGC GGTGAAAAGC
TCCAACCAAC TCGACCCGTC CGAGCGGCTG TACGGCGCCG CGGTACGTGA CGAGCTGGCC
CGCCACTTGG GGATCGACCC CGCCACGTTC GAGCCGCAGC AACCGGCGCT CGTCGCCAAC
GCCCGCGATC TCCCGGCCAT CGCCGAGAAG ATCCCGGTGC ACTTCCAGGC GCGTTTCCTC
GAACTGGTGA ACGCCACGCA CCCGATCGAG GGGCGCGACA TCCTCTTCAA CCTGCTCAAG
ACCTCGCAGG GCAAGTTCAC GACCGAGTGC ATCAACTTCC TCGTCGAGCA GGGCCACGCC
GACGAGCTCG CCGCCGTACT CAAGCGCTGG CAGACCGAGC AGAATCTCCG CGCCCCGGTC
CTGCTCTGGA TCGTCAAGAA CCGGCATTCG AAGAAATTCG CGAAGCTGCT CAACGATCTC
ATCACGCCGC GGCTGCTCGG CGCCATTTTC TTCGCGATCG ATTACGAGGC GCTCCAAGCC
TCCAGCGCGC GCCGGATTCC GCTCGCCGAC ATCCTCAGCG ACGATACGGA GCTGATCGCC
GACCTGCTTT CCACCGCCGA TCCGGAAACC GCCCGCGATC TGGCCAACAC CCTGATGCTC
AACCAGGGCT TCGAGGAGCT GACGAAAAAG TCGCTGCTCG CGCGGTTCAT CAAGATCTTC
CCCAAGATCC AGACGCTGGT CGACTCCGAG GCCGAAACGC GCGAGGAACA GCTCATCGTT
TCGAAGGCCA GCTACGAGCG GAAGCGCGAG GAATACGAGA CCATCGTCTC GAAGAAGATT
CCGGAAAACT CCAAGGCGAT CGCCGCCGCC CGCGAGCACG GCGACCTGCG TGAGAATTCG
GAATACAAGA TGGCCAAGCA GGAGCAGCAG GTGCTCATGG CGCACAAGAC CAATCTCGAA
CGCGATCTCG GCCGCGCCCG CATCTCCGAT TTCAAGGACG CCTCGATCGA TCAGGTCAGC
GTCGGTACGG TCGTCGAGGT CGCCAGCGTC AAGGACGGCC ACCATACCAC CTACACCGTG
CTCGGCGCCT GGGACGGCGA TCCGGAGAAG CATTTCATCT CCTACAAGAC GCCGTTCGGT
GCCGCGTTGC TCGGCAAGAA AACCGGCGAC GTCATCAACG TGAAGACCGA CGCCTCGGAC
GAGGACTACG CGATCGTCAG CATCGCGCGC TACGCCGACA AGGCCTCGTA A
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| Protein sequence | MNSEAVSALI AKNPPLKAAK AQLEAMEPGA YVIHRSWGFG RIKDYDEAAQ RLIIDFKNKK
GHAMDPAFCL TTMEILPANH LLVRKETDPK QVAELIAENP VQLVVETLQT YDNHATTAID
LEITLGQVIG EDKFKKWWAA TKKALAKDPR ISVPQKKTEC YVLRETPVSA EDEILEQFNS
TRSARRRITL AEELIEAIGK KEINTDLSVV LTGVAEAVKS SNQLDPSERL YGAAVRDELA
RHLGIDPATF EPQQPALVAN ARDLPAIAEK IPVHFQARFL ELVNATHPIE GRDILFNLLK
TSQGKFTTEC INFLVEQGHA DELAAVLKRW QTEQNLRAPV LLWIVKNRHS KKFAKLLNDL
ITPRLLGAIF FAIDYEALQA SSARRIPLAD ILSDDTELIA DLLSTADPET ARDLANTLML
NQGFEELTKK SLLARFIKIF PKIQTLVDSE AETREEQLIV SKASYERKRE EYETIVSKKI
PENSKAIAAA REHGDLRENS EYKMAKQEQQ VLMAHKTNLE RDLGRARISD FKDASIDQVS
VGTVVEVASV KDGHHTTYTV LGAWDGDPEK HFISYKTPFG AALLGKKTGD VINVKTDASD
EDYAIVSIAR YADKAS
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