| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4029 |
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| Symbol | |
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| ID | 6204992 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5227793 |
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| End bp | 5229121 |
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| Gene Length | 1329 bp |
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| Protein Length | 442 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693697 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001820903 |
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| Protein GI | 182415837 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00530062 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 5 |
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| Fosmid unclonability p-value | 0.0326348 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAATCCGC CCGCCGCCGC ACCGCAGCCT TCCCGTCCGC TCTCGCTCGG AGTCATTTTC
CTCACGCTGT ACATCGACCT GATCGGGTTC TCCATCATCT TTCCGTTCGT TCCGGATCTG
ATGGAGTATT ACCTGCGTGG CGAAACGCCG GGCGGTCTGC TCGCCTGGCT GCTCGCCCAG
ACCAACGCAC TCGCTGCTCT CCTCGGCAAT CACGACCACC TTGCCGACGT GCTGTTCGCC
GGCGTGCTGA CGTCGTTCTT CTCCATTCTG CAGTTCGTGT TCGCGCCGTT CTGGGGCGCG
TTGTCCGACC GTCGTGGCCG CCGCAGTGTC CTGCTGCTCA CCGTGTGCGG CACCGCGGCC
GGTTACGCGC TCTGGGTTTT CAGCGGGTCG TTCTGGCTCT TCATGCTGTC GCGCGTCATC
TGCGGCGCGT TCGGCGGCAA TCTGTCCGTC GCCACGGCCG CGGTCGCCGA CGTCACCAGC
CGGCAGGAGC GTTCGCGCGC GATGGGTTTG GTCGGCGCGG CCTTCGGCCT CGGCCTCGTG
ACCGGCCCGA TGCTCGGCGC GATTTCCGCC TCGCACAACC TGCTGGCGTC GTATCCCTCG
CTCGCCCGCT TCGGCATCAA CCCGTTTTCC GTTCCGGCGC TGATCGCGCT CGGCATGTCG
CTGGTGAACG TGGTCTGGAT CGCGCTGCGG TTCCGCGAAA CGGTGAGCAC GGCAACGCGG
GACGAATCCG CCGCGACGCG GCTGCGCAAT CCGCTCCGCG CGATCTTCGC GCTGCCCAGC
GCCGCGGTCC GCCGCGCCAA CCTGGTCGCG TTCATCTTCT CGGTCGCATT CGTCGCCATG
GAGACCTCGC TCACCTTCCT CGCCGCCGAA CGGTTCGGTT ATACCGCCCG GCAAAACGGC
ATGCTCATGG TGTTTCTCGG CGTCTGCTCG ATCATCACCC AAGGCATGAT CGTGCGCTGG
CTGCTGCGCG AAACCAGTGA ACTGCGCGTG CTCGCCGGTG GGTTGATTGC GGCGGCCGCC
GGGCTGGTGT GCATCGGACT GGCGCCCGCG CCCTGGCTGG TTTTCGTCGG TCTTGCGTTC
CTCGCCACCG GCTCGGGGCT CGTCAATCCC TCCACCACCG GACTCATCTC GCTCTACAGC
CACACCGCGG AACAGGGGCG CGCGCTCGGC GTGTTCCGTT CGCTCGGCTC GCTCTCGCGG
GCGATCACGC CGGTTTGCGC CGGCACAGCC TACTGGATCT TTGGCGGCGG CAGTGTATTT
GTCGTGGCCG CGGGGTTCGC GCTGGCCGCA CTCTGGCTCA GCCGCACCCT CCCCTTGCCC
GACAAATGA
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| Protein sequence | MNPPAAAPQP SRPLSLGVIF LTLYIDLIGF SIIFPFVPDL MEYYLRGETP GGLLAWLLAQ
TNALAALLGN HDHLADVLFA GVLTSFFSIL QFVFAPFWGA LSDRRGRRSV LLLTVCGTAA
GYALWVFSGS FWLFMLSRVI CGAFGGNLSV ATAAVADVTS RQERSRAMGL VGAAFGLGLV
TGPMLGAISA SHNLLASYPS LARFGINPFS VPALIALGMS LVNVVWIALR FRETVSTATR
DESAATRLRN PLRAIFALPS AAVRRANLVA FIFSVAFVAM ETSLTFLAAE RFGYTARQNG
MLMVFLGVCS IITQGMIVRW LLRETSELRV LAGGLIAAAA GLVCIGLAPA PWLVFVGLAF
LATGSGLVNP STTGLISLYS HTAEQGRALG VFRSLGSLSR AITPVCAGTA YWIFGGGSVF
VVAAGFALAA LWLSRTLPLP DK
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