Gene Oter_4021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4021 
Symbol 
ID6205147 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5216485 
End bp5217537 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content66% 
IMG OID641693689 
Productthreonine aldolase 
Protein accessionYP_001820895 
Protein GI182415829 
COG category[E] Amino acid transport and metabolism 
COG ID[COG2008] Threonine aldolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0531782 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.267182 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGCTG CGACTCCCGC CCCGAACTTC ACTTTCGGCA GTGACAACAC CGCCGGCATT 
TGCCCCGAAG CCTGGGCCGG ATTAACGGAG GCGAACGCCG GTTGCGTCGC CAGCTACGGC
GACGATCCGT TCACCACCAA AGCCAAGGCA CGGATCCGAG AGCTGTTCCA AACCGATTGC
GAGGTATTCT TCGTCTTCAA CGGCACCGCC GCCAACTCGC TCGCGCTCGC CGCCTGCTGC
CGCAGCCCGT TCACCCGCGT GATCTGCCAC GACTACTCGC ACATCGACAC CGACGAGTGC
GGCGCGCCGG AGCTCTTTAC CGGCGGGGCG AAACTGACGG CGCTGTCCGG TCCAAACGGC
AAGCTGCAGC CCGCGGCAGT GGAAGGTGCG CTGCACCTGG GTCACGGGGT GCACTTTCCG
AAACCCGCCG CGCTCTCGCT CACGCAATCG ACCGAATGGG GCACGCTCTA TACCGCGGAC
GAGCTCCGCG CGCTGACCTC GCTCGCGCAC GCCAACGGAC TCGCCGTGCA CATGGACGGC
GCGCGTTTCG CGAATGCGGT CGAGGCGTCG CACCTCTCGC CCGCCGATCT TACCTGGCGT
GCCGGGGTCG ACGTGCTGTC GTTCGGCGGC ACCAAAAACG GCATGCAAAC CGCCGAGGCC
GTCGTGTTTT TCAATCACGA TCTGGCGCGA GATTTCGAAT ACCGCGTCAA ACAGGGCGGC
CAGCTCGCCT CGAAAATGCG TTATGCCGGC GGCCAGTGGC TCGCGATGCT GCGCGATGGC
GCCTGGCTCC GGCATGCGGC GCACGCGAAT GCGATGGCCC GCCGGCTCGC CGACGCGATC
CGCCAGATTC CGTCGCTGCA GTTCATCGTC GAGCCGCAGG TGAACGCGCT CTTCGTCGAA
ATGCCGCCCG CGGTCTACGC CGCGCTCACG GCGCGCGGCT GGCAGTTTTA TCGTTTCATC
GGCGAGAACG GCTATCGGCT GATGTGCTCG TGGGCGACAA CCGAGGCCGA GGTCGACGCG
TTCGTCGCTG ATCTGCGCGC GACGGCGCGA TAG
 
Protein sequence
MCAATPAPNF TFGSDNTAGI CPEAWAGLTE ANAGCVASYG DDPFTTKAKA RIRELFQTDC 
EVFFVFNGTA ANSLALAACC RSPFTRVICH DYSHIDTDEC GAPELFTGGA KLTALSGPNG
KLQPAAVEGA LHLGHGVHFP KPAALSLTQS TEWGTLYTAD ELRALTSLAH ANGLAVHMDG
ARFANAVEAS HLSPADLTWR AGVDVLSFGG TKNGMQTAEA VVFFNHDLAR DFEYRVKQGG
QLASKMRYAG GQWLAMLRDG AWLRHAAHAN AMARRLADAI RQIPSLQFIV EPQVNALFVE
MPPAVYAALT ARGWQFYRFI GENGYRLMCS WATTEAEVDA FVADLRATAR