Gene Oter_4013 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_4013 
Symbol 
ID6205225 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5208101 
End bp5209330 
Gene Length1230 bp 
Protein Length409 aa 
Translation table11 
GC content64% 
IMG OID641693681 
Producthypothetical protein 
Protein accessionYP_001820887 
Protein GI182415821 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0707] UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGGCAAGC TGCGCATATT GGTGCTGACC TCCAGCACCG GCGGTGGCCA CGATGCCCGC 
GCCGAGGCGT TCGCCGAGTG GTGCTTTCAG CTCTACCGGC ACGATGTCGA GGTGCGGATC
GAGCAGATGC TCGAGAAATC CTCATTCGTG AACCGCACCG GCGTGCGGCT CTACAACCGG
ATCCAGCGGA GTGCGCCGTG GGTGCACAAG CTGTTCTACG CGATCGTGGA ACTGCTGAGC
GTCATCAACC GACGCAACGT GGTGTTTGGC CATCGCTACT ACGTCGAGGT GTTGCACCGC
TACCGGCCGC ATCTGGTCTT CAGCGTGCAC GACTGCCTCA ACCGCGGCTA TTTCCAGCTC
GCGCGGCAGA TCCTCGGCGC CTCGAACGTC CGCTGTGCCA CGTATTGCGG CGAGTTCTCC
GGCGGGTGGG GCTACTCGCG CAACTGGATC GAACCGACCG TCGATCTCTA TCTTTCGCGG
ACCGGCACCG CCCGCGATTA CGCGGTGAAG TGCGGCCTCC CGGAGGAACG CGCCCGCGTG
CGGGGATCGA TGATGCATCC TCGGGCCTAC CTCGAAGTGC TGAGCCCGGG CGAGCGGCAC
TCGTTCCTGA CGCGGAAGCT CGGACTCGAT GCCGACCGGT TCACGGTGTT CCTGGCGACC
GGCAGCAACG GCGCCAACAA CCACTTCGAA CTGCTCGCCG GCTTGCTGCG GCACGCCGAT
CGCGTGCAGG CGATCCTGAT CTGCGGGCGC AACAAGCAAG TCTACAATGA CCTCGTGCAG
TGGCGCACGG AGCACCCGGA GTTTTCCTGC TACATCGAAG GCTACTCGGA TGTCGTGCAC
CTGTTGATGC AGGTCAGCGA TGTGATTGTC ACGCGCGGCG GCACCACCAC GTGCGCGAAG
GCGCTGCATT TCCGCTGCCC GATTGTGTTC AATGCGTTCG GCGGGATCAT GCCGCAGGAG
CAGCTGACCT GGAAATTTTT CCGCAACGGC GCCGGTTGCC GCAAGGTGGA GAGCGGCGAG
GACTTCGCCG CGATCATCGA TGAATGGACC GACAAGCCCG GAGCCTACCT GGTGGCGCGC
GACAACTTCC TGCGGCTGCG CTACGAGGAG GATCCCACGG TCGTGATCGA CGAACTTGTC
GGCCTGGCCA ACGAGGTGGC GCAGGTGAGA TTGAAGCGCC GCGCATTCCC GCCGCCGAAC
GGGAATGGAA ACGGCGGAAA GACCGCTTAG
 
Protein sequence
MGKLRILVLT SSTGGGHDAR AEAFAEWCFQ LYRHDVEVRI EQMLEKSSFV NRTGVRLYNR 
IQRSAPWVHK LFYAIVELLS VINRRNVVFG HRYYVEVLHR YRPHLVFSVH DCLNRGYFQL
ARQILGASNV RCATYCGEFS GGWGYSRNWI EPTVDLYLSR TGTARDYAVK CGLPEERARV
RGSMMHPRAY LEVLSPGERH SFLTRKLGLD ADRFTVFLAT GSNGANNHFE LLAGLLRHAD
RVQAILICGR NKQVYNDLVQ WRTEHPEFSC YIEGYSDVVH LLMQVSDVIV TRGGTTTCAK
ALHFRCPIVF NAFGGIMPQE QLTWKFFRNG AGCRKVESGE DFAAIIDEWT DKPGAYLVAR
DNFLRLRYEE DPTVVIDELV GLANEVAQVR LKRRAFPPPN GNGNGGKTA