| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_4005 |
|---|
| Symbol | |
|---|
| ID | 6205336 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 5199424 |
|---|
| End bp | 5200176 |
|---|
| Gene Length | 753 bp |
|---|
| Protein Length | 250 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 641693673 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001820879 |
|---|
| Protein GI | 182415813 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.151604 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCCCGCCG TCCGCCCTCT CTCCCTTGCA CTGCTGCTCG ATCGTGGTGA CACGCTGGTG
GCGTCGCGGG ACGCAGACGC CCAGCGTTAC TGGCGCGAGA ACCGGCGCCG GATCGCCACG
GCCGTGGCGC GCGCGTCCGA ACTCGTGCCG CGCGCGGCCC CGGCGGCCAG TCCGGCGCGC
GTGCTCGACA TCGGTCCGGC GCTGGAGGTC GAACTACTCG CGGAGTTTTT GCCGGGCATC
GCGCTGGAAA CGATGGGTTG GGCCGATCAC CGCTATCAGA CCCCCGCGCT GCGCGCCCAT
CATCCGTTCG ACCTGAACGA CGCGGCCGAT CCCGCCCGCT GGCCGCGCGT GGAGCGCTGC
GATCTGATTC TGCTGCTGGA GGTGATCGAG CACGTGCACA TTTCGCCGCT GCATGTCTTC
CGGATGCTGC GTTCGTTTCT CCGGCCCGGT GGATATCTGC TGGTATCGAC GCCCAACGCC
GCCTGGCTGC GCAACCGCTG GCTACTCCTC ACGGGCCACA ATCCCTTCGA GCTAATACGC
GAGGATCCGC GGAACCCCGG GCATTTTCGC GAGCTCACCC GCAGCGAACT GCGACGGCTG
CTCGAGCGCG CGGGGCTCCG GGTCGTCGCG CTCGAACTCG ACACGCTTTA CGCCTTCTCG
TCCGCCTCCG GTCGTCGATT CAGCCGGCTG GCGCGACTGC TGCCGCCGGC GTTCCGGCAC
GACATGCTGT GCACGGTTCA GCGCGTTGAG TAA
|
|---|
| Protein sequence | MPAVRPLSLA LLLDRGDTLV ASRDADAQRY WRENRRRIAT AVARASELVP RAAPAASPAR
VLDIGPALEV ELLAEFLPGI ALETMGWADH RYQTPALRAH HPFDLNDAAD PARWPRVERC
DLILLLEVIE HVHISPLHVF RMLRSFLRPG GYLLVSTPNA AWLRNRWLLL TGHNPFELIR
EDPRNPGHFR ELTRSELRRL LERAGLRVVA LELDTLYAFS SASGRRFSRL ARLLPPAFRH
DMLCTVQRVE
|
|---|
| |