| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3996 |
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| Symbol | |
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| ID | 6205418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5187049 |
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| End bp | 5187975 |
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| Gene Length | 927 bp |
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| Protein Length | 308 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693664 |
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| Product | glucose-1-phosphate thymidylyltransferase |
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| Protein accession | YP_001820870 |
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| Protein GI | 182415804 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
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| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.206121 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCCTTCGC TCCCACTTCA ACTTTCCACG TCAACGGATG GTGCCGCGGC ACCATCACGC
CGCGGCATCA TCCTCGCCGG CGGTTCCGGC ACGCGGCTCT ACCCTCTGAC CGTCGCTGTC
TCGAAACAGC TGATGCCGGT CTACGACAAG CCGATGATCT ACTATCCGCT GTCGGTGCTC
ATGCTCGCCG GCATTCGCGA AATTCTGATC ATCTCGACGC CGCTCGATCT GCCGCTTTTC
CGGCGGCTCC TCGGCACGGG TGAGAACATC GGGGTGCGTT TCACCTACGC CGAACAGCCC
CGGCCCGAGG GTCTCGCGCA GGCGTTCCAC ATCGCCGGCG ACGTTGGCTT CCTCAACGAC
GAACCCGCGG CGCTGGTGCT CGGCGACAAC CTTTTCTACG GCCACAATCT CGCTGCCTCG
TTGCGCGAAG TCGCCGCCCG CACGGACGGC GCCACCATCT TCGGCTATCA CGTCGCCAAT
CCCGCCGCCT ACGGTGTCGT CGAGTTCGCG CCCGATGGCC GCGTGCTGTC ACTCGAGGAG
AAGCCTCGCC AACCCAAGTC CAACTACGCC GTACCCGGGC TCTACTTCTA CGATCGCGAG
GTCGTCCGGC TCGCGCGCAC GCTCAAGCCG TCCGCCCGCG GCGAGATCGA GATCACGGAT
CTCAACCGCC GCTATCTCGA GGCCGGCAGG CTCAAGGTGG AATTGCTCGG CCGCGGCACC
GCCTGGCTCG ATACGGGCAC GCACGACTCG TTGATGGACG CCGCGCAGTT CGTCCAAGTG
CTCGAAAATC GCACAGGGCT GAAAATCGCC TGCGTCGAGG AAATCGCGTT CGAAGCCGGC
TGGATCGATC GCGCGTGCCT CGAGGCCAAC GTGCAGCGGC TCGGCAAATC GTCCTACGGC
GAGTATCTCC GCCGGCGGCT GAGCTGA
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| Protein sequence | MPSLPLQLST STDGAAAPSR RGIILAGGSG TRLYPLTVAV SKQLMPVYDK PMIYYPLSVL
MLAGIREILI ISTPLDLPLF RRLLGTGENI GVRFTYAEQP RPEGLAQAFH IAGDVGFLND
EPAALVLGDN LFYGHNLAAS LREVAARTDG ATIFGYHVAN PAAYGVVEFA PDGRVLSLEE
KPRQPKSNYA VPGLYFYDRE VVRLARTLKP SARGEIEITD LNRRYLEAGR LKVELLGRGT
AWLDTGTHDS LMDAAQFVQV LENRTGLKIA CVEEIAFEAG WIDRACLEAN VQRLGKSSYG
EYLRRRLS
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