| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3992 |
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| Symbol | |
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| ID | 6205432 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5183928 |
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| End bp | 5184473 |
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| Gene Length | 546 bp |
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| Protein Length | 181 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693660 |
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| Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
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| Protein accession | YP_001820866 |
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| Protein GI | 182415800 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
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| TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.677936 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAACGTCC TCGCCTGCGA ACTCGACGGC CCGCTGATCA TCGAACCGAA GGTCTTCGGC
GATCAGCGGG GATTCTTCCT CGAATCGTGG AGTCGCCCCC GGTATCGCGC CGCGGGCATC
GCGCTCGACT TCGTGCAGGA CAACTTTTCG TTCTCCCGCC GCGGCACGCT GCGCGGCATG
CACGCGCAGA ACCCGCATCC GCAGGGCAAG CTCGTCTCCG TCTGGCAGGG TGAGGTCTGG
GACGTGGTCG TGGACCTTCG GCGAAACTCG CCGACGTTCG GCCGCTGGTT CGGGCTCACG
CTGTCCGCCG AGAACAAGCG CCAGTTTTGG GTTCCGCCGG GTTTCGCCCA CGGCTTCGTG
GTCACGAGCG AGACGGCGTT GTTTCACTAC AAGGTCACCG ACGCCTACGC TCCGCAGGAC
GAGATTGCTT TCCGCTTCGA CGATCCTGCC GTCGGCATCC GCTGGCCGGT GAGCGATCCG
ATTCTTTCCA CCCGCGACAC CCAGGCGCCG CTGCTGCGCG ATGTGCCATC GGCTCGTCTC
TTCTAG
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| Protein sequence | MNVLACELDG PLIIEPKVFG DQRGFFLESW SRPRYRAAGI ALDFVQDNFS FSRRGTLRGM
HAQNPHPQGK LVSVWQGEVW DVVVDLRRNS PTFGRWFGLT LSAENKRQFW VPPGFAHGFV
VTSETALFHY KVTDAYAPQD EIAFRFDDPA VGIRWPVSDP ILSTRDTQAP LLRDVPSARL
F
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