| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3967 |
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| Symbol | |
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| ID | 6205631 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5150469 |
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| End bp | 5152112 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693635 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001820841 |
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| Protein GI | 182415775 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.301928 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACACGC TTCGACCAGT ATCCGAGCTC GAAATCGCCG CCGGGGCAGT GATCGTGAGC
CCCGAGAAAT TCGTTGCCAT GGGAACGCCG CGCCCCGACT TTCTCGGCTT TGGGCGCAAT
GTATTATCCT CTTCGATCCA AAGCGTGCTG GTCACCCGCA AGTCCGGATG GGCACCGCGG
TGGATCCCGA CCGGTGCTCC TGCGCATTCC GTGAACATCG TGACTTTCAT CAACCTGCGG
TTCTGTCGTG TGCGCTACCT GGCCCTGCTG TTCGGAGCAG TCGGTTTCGT GCGGGCCGAG
ATCCGGCCGG ACGCCGGATC GGGATCGAAC GGTCAGCCGG CTCCGGTGGC TGGTGCGACT
GCCTCTGACG AGTGGACGCT CGATCGAGCG GTGGCGCGAG CACTGGAAGC CAACCCGGAC
CTGCTGTTGG CCAAGCACGA GTTCGAGCGG CAGGAGGGCG CGCGCCTTCA ACTCGTCGCG
CGCATGCTGC CGCAGCTGAG CGCCAGTGCC AGCGCGAACG AGCGCGCCCG CGGACTCATC
GATCGTTCGC CGGGCGAACG CAACATCCCG CCCTCCGCCC AGACGGCGGT TGCGCTCTAC
AGCTATGACA TGCGGGTTGA GGTGCGGCAG TTGGTGTTCG ACGGGCTGGC CTCGTGGCAT
CAGGTAAAGC GGCAGCAGTT GTTAAAGAAA CAGGCCTATC TCGTGCTGCG CAACACCGTC
GCCCGAACGA TCAGCCAGGT GCGCCAGGGC CTGGATGCGA TCCAACTCAG AACCTCCACG
GTCGCGGCCG AGAAACGCCG CGTTGAGGAA TATATTCAGC TCGTGGAATG GACCTCCCGG
AAGCAGGCCG AAGGTGAGGT GCCGGAATTC GAACTGTTGC GGGCGGAAGC CGAGGCGGAA
GGGGCCCGGG CGGATCTGGC GGAAGCCCGT CGGGCGCTGG GCGCGGCGGA ACAATCCTTC
CGCCGGTTGC TGCAGCTACC CGATTCCAAG CAGCCCGTGC GGGTGGCGGG CGAGTTCACG
GCGCGGCCGT TCGATCTGCC GTTCGAGGAA GCTCTGGGCG AGGCGCGAGC AAACCGGCCC
GACCTGGAGG CGGCTGCGGT CGCAGTCGCG GCGGCGAAGG CCACCGAACG CGCGGAGGTG
GGAAACTGGC TGCCCACCGT CGAGGCGTTT GCCTCCTATG GCGAGCGTAG TTCCTATTAC
AATTCAGGCA TCCGACTCGA CGGCTGGACA TACGGGGTCA TGGGGGAATG GAATCTTTTC
GAGGGAGGCG CGTCGCGCGG GCGGCGCATG GCCGCACGCG CCGAGCGGCG TTCCGCTGAA
ACCCGCCTGG CGGAAACGGA GCATGGCGTC GTATCCAAGC TTCACGAACT CTATGAGGGG
CTGGCGCAGG CCAGGGTCGC GATGGAGGCT CAACAAAAGA GCGTGGACAT GGCCAGCCGC
GCGGCGCGCG ATGCCCGCCG ACTCTACGAG GAGGGCCAGG CGAGTCTGGA GCAGGTGCTG
CAGGCGACGA TGACCCTGCG GCGGGCGGAG ACCCGCTTGG GCGAGTCGAT CTACACGCAG
AACGCGATGA TTGCCGAGAT CGAGTTCTCC GTGGGCGGGC AGATCCGCGA CTCGATCGCG
GTACCGGACA CATGGAAGCC GTAG
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| Protein sequence | MHTLRPVSEL EIAAGAVIVS PEKFVAMGTP RPDFLGFGRN VLSSSIQSVL VTRKSGWAPR
WIPTGAPAHS VNIVTFINLR FCRVRYLALL FGAVGFVRAE IRPDAGSGSN GQPAPVAGAT
ASDEWTLDRA VARALEANPD LLLAKHEFER QEGARLQLVA RMLPQLSASA SANERARGLI
DRSPGERNIP PSAQTAVALY SYDMRVEVRQ LVFDGLASWH QVKRQQLLKK QAYLVLRNTV
ARTISQVRQG LDAIQLRTST VAAEKRRVEE YIQLVEWTSR KQAEGEVPEF ELLRAEAEAE
GARADLAEAR RALGAAEQSF RRLLQLPDSK QPVRVAGEFT ARPFDLPFEE ALGEARANRP
DLEAAAVAVA AAKATERAEV GNWLPTVEAF ASYGERSSYY NSGIRLDGWT YGVMGEWNLF
EGGASRGRRM AARAERRSAE TRLAETEHGV VSKLHELYEG LAQARVAMEA QQKSVDMASR
AARDARRLYE EGQASLEQVL QATMTLRRAE TRLGESIYTQ NAMIAEIEFS VGGQIRDSIA
VPDTWKP
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