| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3945 |
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| Symbol | |
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| ID | 6206067 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5120384 |
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| End bp | 5121370 |
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| Gene Length | 987 bp |
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| Protein Length | 328 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641693613 |
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| Product | GDP-mannose 4,6-dehydratase |
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| Protein accession | YP_001820819 |
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| Protein GI | 182415753 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1089] GDP-D-mannose dehydratase |
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| TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.406952 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCAAGA AAGCCTTCAT CACCGGGATC ACCGGTCAGG ACGGATCTTA TCTGACTGAG
CTGTTGCTCG AAAAGGGCTA CGAGGTCCAT GGCCTCGTCC GCCGGGCGAG CACGATGAAC
CGCGGCCGGA TCGACCATCT CAACGGCTTC GAGCACGGGC CCGACAAGCG GCTGTTTCTC
CACTACGGCG ACCTCGCCGA CAGTGTTTCG CTGGTGAAAC TGCTCTACGC GCTGCAGCCG
GACGAAATCT ACAATCTCGC CGCGCAAAGC CACGTGCGCG TGAGCTTCGA CGTGCCCGAA
TACACCGCGG ACATCACCGG CGTGGGCGCA GCCCGCATTC TTGAGGCGAT CATCGAATCC
GGCATCGGCA AAAAAGTCCG CTACTACCAG GCATCGTCCT CTGAAATGTT CGGCAAGGTG
CAGGAGGTAC CGCAGCGCGA GACCACGCCT TTTTATCCGC GTTCGCCCTA TGGCTGCGCG
AAGGTCTTCG CGCACTGGCT CACGGTGAAC TACCGCGAAT CCTACAATCT TTTCGCGTGC
AGCGGCATTC TGTTCAACCA CGAGTCGCCG CGGCGCGGCG AGAGCTTCGT CACGCGGAAG
ATCTCGCTCG CCGTCGCGCG AATCAAGAAG GGCCGGCAAA AGGAGCTTTA TCTCGGCAAC
CTCGACGCAC AGCGCGACTG GGGCTACGCC AAGGAATACG TCGAAGGGAT GTGGCGAATG
CTGCAACAGG ACCAGCCGGA CGATTACGTG CTCGCGACCA ACGAGACGCA CACCATCCGC
GCCTTCCTCG AGGCGGCGTT TGGTCGCGTC GATCTCGACT GGCACGATTA CGTGCGGTTC
GACGAGCGTC ACCTCCGTCC GGCCGAGGTC GACCTGCTGA TCGGCGATTA CTCCAAAGCC
CGCGCGCGGC TCGGCTGGGA ACCACACACG CGGATGAAGG CGCTCGCCGA ACTCATGGTC
GACGCCGACC TCGCGGCGAT CGGGTGA
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| Protein sequence | MPKKAFITGI TGQDGSYLTE LLLEKGYEVH GLVRRASTMN RGRIDHLNGF EHGPDKRLFL
HYGDLADSVS LVKLLYALQP DEIYNLAAQS HVRVSFDVPE YTADITGVGA ARILEAIIES
GIGKKVRYYQ ASSSEMFGKV QEVPQRETTP FYPRSPYGCA KVFAHWLTVN YRESYNLFAC
SGILFNHESP RRGESFVTRK ISLAVARIKK GRQKELYLGN LDAQRDWGYA KEYVEGMWRM
LQQDQPDDYV LATNETHTIR AFLEAAFGRV DLDWHDYVRF DERHLRPAEV DLLIGDYSKA
RARLGWEPHT RMKALAELMV DADLAAIG
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