| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3940 |
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| Symbol | |
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| ID | 6206282 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5114435 |
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| End bp | 5115823 |
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| Gene Length | 1389 bp |
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| Protein Length | 462 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641693608 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001820814 |
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| Protein GI | 182415748 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.200003 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGTC TCCTTCGCCT TCTGGCCTTC GCGGGCGTCT GCTCCGTTCT CTTCGTCGGC
TCCCTTCCAG CGCAACCGCT GCGCAGTCCC GTCCTGCCGC TGCCCGAAAA CTACTTTCCC
GGGTTGAAGC GGTTGCTGGA AACCGCGGTC AAGCAGGCGC CGCGGATGAT CGCCCGCAAC
ACCGACGAGA TTGTGGCCGA AGCCGAGCGG ACGACGCTGC GTGCAGGCCA GCTGCCCTCG
ATGCGGGCCT ACGGCAGCTA TTACCCGTGG ACGCAGGATC GCCGGGGCGA CGCCTCGGAA
ACCACCACGA CCCAGAAGGT GGCTTACAAC GTTTTTCTCG AACAACCGCT CTTCCATTGG
GGCGCGTTGA AGGACGCCAG CCGGATCGGC GAGCTGAAGG TGAAGATTGC CCAGGGAGAC
ACCGTCGAAG CCTACCGGCT GCTGATCAGC GAAATCCGCT CCCAGTATCT TCAGCTGATT
TTCAAGCGAC TCAGCGTGGA GCGGACGCGC GCCACGCAGC GGATGGCCGA ACAATCGTGG
CAGATCGCGC GCGAGCGGTT CGAACGCAAG GAAATCTCCG AATCCGACCT GTTCTCCGCG
CGGATGGGCG CCGAGCAGGC CCGGCTGTGG ACGGATCGGT TTCAGGAGGA TTACGATACC
GCGCGGTATG TGCTCGGGAA ACTTTGCGGC ATGCCGACGA TTCCGGACGA GGAGGTGCCG
CGGGAAATCC CGGCGATCGC GCGCGCGGAA ACCGAGATCG ACGGCCTCGT GCGCGCGTTC
ACCACCCAGG AGGATCCGGT GACCTACGGA CTGGAGAATC TCCGCCGCCA GGTCGATATC
GAGCAGTTGA ACTACGACAT CGCAAAGACG CGGTTGCGGC CAAAGGTGAA CGCAGTCGTG
GGATTGACGC AGGACCAGCA GGACTATGTC TACACGCAGA ACAGCGCCCG CAACTACCGC
TACGAAGTGC AGTCGCTCTA CACGGGAGTT TCGGTGAACT GGTCGATCTT CGACGGGTTT
GCCAGCCGCG CGGCCAAGGC GTCGGCGCTG GCGCGGCGGC GACAGGCCGA GCGCACCTAT
GAAGTGCAGC GCGAGAACGT GTTGGTGAGC GTCCGCGCGA AAAAACGACA GTTGGACTTC
GCCGCGCGCG GGCTGGCGAT GTCGGAGGAG TATCTCGCGC TCGGCGAGCG CAGCTTCCGG
ACCAAGGAAG AGGATCAAAA GCTCGGGCTC GCGTCGCCCA CCGATCTCGA GAACGCGCGG
CTGCAGCTGT TTGATGCGCG GGTGAGCACC TTTAACGCCC GTCAGGATTA CCTGCTGCGG
GCGGCGGATT TGCTCTCCGC CACGTTGAAC GATCCTGCGC TCACGAACCT GCCCTCTTTA
CCTCGATGA
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| Protein sequence | MLRLLRLLAF AGVCSVLFVG SLPAQPLRSP VLPLPENYFP GLKRLLETAV KQAPRMIARN
TDEIVAEAER TTLRAGQLPS MRAYGSYYPW TQDRRGDASE TTTTQKVAYN VFLEQPLFHW
GALKDASRIG ELKVKIAQGD TVEAYRLLIS EIRSQYLQLI FKRLSVERTR ATQRMAEQSW
QIARERFERK EISESDLFSA RMGAEQARLW TDRFQEDYDT ARYVLGKLCG MPTIPDEEVP
REIPAIARAE TEIDGLVRAF TTQEDPVTYG LENLRRQVDI EQLNYDIAKT RLRPKVNAVV
GLTQDQQDYV YTQNSARNYR YEVQSLYTGV SVNWSIFDGF ASRAAKASAL ARRRQAERTY
EVQRENVLVS VRAKKRQLDF AARGLAMSEE YLALGERSFR TKEEDQKLGL ASPTDLENAR
LQLFDARVST FNARQDYLLR AADLLSATLN DPALTNLPSL PR
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