Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3931 |
Symbol | |
ID | 6206523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 5102765 |
End bp | 5103403 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693599 |
Product | hypothetical protein |
Protein accession | YP_001820805 |
Protein GI | 182415739 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.119057 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGCCACG TCTACCTCGT CACCGCTTTC GTGGTCGTGC TGCTGTTCTC CCTCCTGGGA CTGCGCGGCA CGAAATTCAC ACGTCCGCCG ATGGACGTTT TCCCGGAGTG GGCCTTCCCG GGCATGAAGC ACCAGCCGTT CTACAAGCCG CAGCGCGAGA GCGCGTTTTT CGCCGACGGT CGCGCCGACC GTCCGATCCC GCAGCACACG GTTGCCCGCG GACAGCTGCG GAACGACGAT GCGCTCGATC TCGGCCGCGC GGCGGACGGC AACTGGCTGC GCGGGTTCCC CGCGGCGGTC ACGGTTAACG CCGAACTGAT GGCGCACGGC CGCGAACGCT TCCAGATCTA CTGCCAGCCC TGCCACGGTG CCGCCGGCGA CGGCAATGGC ATCACCAAGC AATACGGCAT GGGTGCCACG CCGACCTACC ATGATCCGCG GCTGCGCGAC ATGGCGGAGG GTGAAATTTT CAACACGATC ACGCACGGCA AGGCGAACAT GCTGCCGTAT GCCGACAAGC TGCTCCCCGA GGAGCGCTGG GCCGTGATCC TCTACGTGCG TGCGCTACAA CGCGCGCAGA TGGGCACAGC GGCGGACGTC AACGACGCCG CGGCCAAGCA AACTCTCGGC CTGCAATGA
|
Protein sequence | MRHVYLVTAF VVVLLFSLLG LRGTKFTRPP MDVFPEWAFP GMKHQPFYKP QRESAFFADG RADRPIPQHT VARGQLRNDD ALDLGRAADG NWLRGFPAAV TVNAELMAHG RERFQIYCQP CHGAAGDGNG ITKQYGMGAT PTYHDPRLRD MAEGEIFNTI THGKANMLPY ADKLLPEERW AVILYVRALQ RAQMGTAADV NDAAAKQTLG LQ
|
| |