| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3928 |
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| Symbol | |
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| ID | 6206535 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 5099787 |
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| End bp | 5101193 |
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| Gene Length | 1407 bp |
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| Protein Length | 468 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641693596 |
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| Product | cytochrome c oxidase, subunit I |
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| Protein accession | YP_001820802 |
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| Protein GI | 182415736 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.350751 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCTCTG CTCAGACTGA AATCAGCGAA GTCGACTCGA CCGCGCGGTT CCCGCTGTCG
CTGCTGCTCG CGTTCGCCGT GCTCTGGGCG CTGGCGGGCG GGGCGCTCGC GCTGCTGAAC
TACGCGCAGA CGCTCGACCC GGCGCTGCTG GCCGACTGCG CGCTGCTGAC TTACGGCCGC
GTGCGCGGCA TGCAGGAGAC GGCGCTCGTC TACGGCTGGG CGGGCAACGC CGGATTCGCC
GTGGCCCTCT GGCTGCTCGG CCGGCTCAGC GGCGCGCCCC TTCGTTCATT GAACTGGGTG
GTGGTGGGCA CGCTCTTCTG GAACTTCGGC GTCGCCCTCG CCATCGGCGG GATCGCGGGC
GGACACGGAA CCTCGATCGT GCTGCTCCGG ATGCCGGCTT ATGTGCAGTG GTTTTTGCTG
GCGGCGTTTG CGGCCATCGC CGTGCCGGGC GTGCTCGCCT GGACGGGACG CGCGCACAAG
CCGATGTTCG CCGCGCAATG GTATGCGGTC GCGGCGCTGT TTCTCTTCCC CTGGCTCTTC
TCCGCGGCCC ACGTGATGCT GGTGGTCGCG CCGCTCCGCG GCGTGCTGCA GCCGGTGGCG
GAAGCGTGGT TCGCGCAGAG CCTCTGGACG CTCTGGATGG CGCCGGTGGC GCTGGCCGCG
GCGTATTATC TGGTGCCTAA GATCACGGGT CGCGCGATTC CCAGCTACGA TTTTGCGGGC
CTCGGCTTCT GGACGCTGCT GGTCATCGGC GCGTGGACCG GCGGCCGCCA TCTGATCGGC
GGGCCGGTGC CCGCGTGGAT CGCCACGATC GGCATCGTCG CGTGTGCGGT GCTCACCTTC
CATTACCTGG TGGTGGCGAT CAACCTCTCC GGCGCCTTCC GGCGTTCGGG CTTTACGCTG
AAGTTCGTCG CGTTCGGCGT CGCGGCCTAC GTGCTCGGTG GATTTGCCGA CGCGGTGTTG
TCGCTGCGAA GCGTGGCCGA GGTCACCCAA TTCACCTGGA TGAGCCAGGC GCAGAGTCAG
CTCGCGCTCC TGGGCGCGTT TTCGATGATT GTGACGGGCG CGATTTATTT CCTCGTCCCG
CGAATCGCGA ACCAGCCGTG GGTCTCGACC CCGTTGATCC GCGCACACTA CGCGGCCGCC
GTGATCGGGG TGATCGCGCT CGTGGGCGGC CTGGCCGCGG CGGGCATCGT GCAGGGCCGG
GATCTCAACA ACGCCGCGGT GGCGCTGGTC GACATCGCGA CCCACACGCG TCCGTGGCTC
CTCGTGGCGG CCGCAGGGCA GGCGCTGCTG CTGGTGGGAA ATCTGGTGCT GGCGGCGCAC
CTCGTGCGGT TGTGGACGAC GAAGCCGGAG ACGCCGGCGG CCGAATTGAT TCGTGAGCCG
CACGCCATGG AGGCTTCAGC ATCATGA
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| Protein sequence | MTSAQTEISE VDSTARFPLS LLLAFAVLWA LAGGALALLN YAQTLDPALL ADCALLTYGR
VRGMQETALV YGWAGNAGFA VALWLLGRLS GAPLRSLNWV VVGTLFWNFG VALAIGGIAG
GHGTSIVLLR MPAYVQWFLL AAFAAIAVPG VLAWTGRAHK PMFAAQWYAV AALFLFPWLF
SAAHVMLVVA PLRGVLQPVA EAWFAQSLWT LWMAPVALAA AYYLVPKITG RAIPSYDFAG
LGFWTLLVIG AWTGGRHLIG GPVPAWIATI GIVACAVLTF HYLVVAINLS GAFRRSGFTL
KFVAFGVAAY VLGGFADAVL SLRSVAEVTQ FTWMSQAQSQ LALLGAFSMI VTGAIYFLVP
RIANQPWVST PLIRAHYAAA VIGVIALVGG LAAAGIVQGR DLNNAAVALV DIATHTRPWL
LVAAAGQALL LVGNLVLAAH LVRLWTTKPE TPAAELIREP HAMEASAS
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