Gene Oter_3920 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3920 
Symbol 
ID6206762 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5090466 
End bp5092742 
Gene Length2277 bp 
Protein Length758 aa 
Translation table11 
GC content65% 
IMG OID641693588 
Productresponse regulator receiver sensor hybrid histidine kinase 
Protein accessionYP_001820794 
Protein GI182415728 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCATCCA CGCCGCCTCG TCCCCCGACC GCACGAAGCA ACCGCGTCCT CGTGATCGAC 
GACAATCCGT CGATCCATGA AGACGTGCGC AAGATTTTGT GCCCGTCGGT GACCGAGACC
GGCAGCAATC TTGACGCGTT GGAGGCGGAA CTCTTCGGTG CACCCGACGC GCCGGCGACC
GCGAAGCGGG ATATGCCGTC GTTTACGGTC GATTGTGCGC ACCAGGGGCA GGAAGGGTTG
GCCTTGGTGA AAAAAGCGAC GGCCGAGGGC CAGCCCTACG CCATGGCGTT CGTCGACATG
CGAATGCCGC CGGGCTGGGA CGGAGTCGAA ACCACGCTCG AAATCTGGAA AGTGGCGCCC
GACCTGCAGA TCGTCATCTG CACCGCCTAC TCCGACTACT CGTGGGACGA CCTGCTCGCG
AAGATCGACG GCTCCGACCG GCTGGTGATC CTCAAGAAGC CGTTCGACAC GATCGAGGTG
CTGCAACTCG CCAACGCCCT CACGGCCAAG TGGAACCTGC TGCAGGAAAC GAAGGCCAAC
GCGGACGAAC TCGAAGCACG GGTGCGCGCA CGCACCGCGG AGCTCGAGAG CGCGAACGCG
CTGCTGCACG AGGAGATCGG CCGTCGGATG CTGGTGGAGC TCGATCTGAA ACGCGCGAAG
GATGCCGCCG AAGCCGCCGA CCGCGCGAAA AGCGTTTTCC TGGCCAACAT GAGCCACGAG
ATCCGCACGC CGATGAACGG CGTGCTGGGC ATGGCCAACC TGCTGCTCGC GACGCCGCTC
AATCCCGAGC AGCACGATCT CGCCGAGACC TTGTGCCAGA GTGGCGAAAG TCTGCTCACG
ATCATCAACG ACATTCTCGA TTTTTCCAAA ATCGAGGCTG GGCGGATGGA GCTCGAAGCG
ATCGATTTCG ACCTCGCCGA CAATCTCGAG CTCGCGCTCG ATCTGCACGC CGAAGCGGCC
GCGCGCAAGC ACCTCGAGCT CGTCGTCAAC ATCGACCCCG CGGTACCCCG GCACGTGCGC
GGCGATCCCG GCCGGCTGCG GCAGATCCTC CTCAACCTCG TCGGCAACGC CATCAAGTTC
ACCGAAAAGG GCGAGGTCGT GGTCAAGGTC ACCGTCGACC ACAACTGGCC CAACCGCGTG
CTGCTGCGCT TCGCCGTGAC CGATACGGGC ATCGGCATTC CCGAGTGGGT GCAGGAAAAA
CTGTTCCAGC CGTTTGTCCA GGCTGACACC TCGACGACGC GCCGATTCGG CGGATCGGGA
CTGGGGCTCG TGATCTGCAA GCGGCTCGCC GAGTTGATGT CCGGCTCGAT CGGTGTCGAG
AGCAAGCCCA ACGAAGGCTC GACGTTCTGG TTCACCGTGG AGCTCAAGCA CGCGTTTCAC
CCCGTCACCG TCGGCGTCGT GCCGTTGTCG ACGCTGCGCG GTCATCACGC GCTGATCGTC
GACGACAACG CCACCAACCG CTCACTGCTC AAACATCTCT GCAATGCCTG GAGTCTGCGG
CATAGCGTGA TGGAGTCCGT CGACGAAGCG CTGGTGGAAC TGCATCGCGC GACCGCCGCC
GGCACGCCCT TCGACCTGGT CATCACCGAT CACCACATGC CGGGACGGGA CGGACTCGAT
CTCGCAGCGG CGATCAATCG CGACACGACC ATTCCGCGGC CGGCGCTGGT GCTGCTGACC
TCTCGCGGCG AACGGCTCCC GCAATCGCAG CTCGACGAAT ACCGCTTTGC CGCCTGCGAG
TTGAAGCCCG TGCACGCGCG CAGCCTGCAC ACGACGCTCG CCCGCGTCCT GGCCCATATC
CGTCCAGGCG TGCCCGCCCT GCCCGACGGG AATGGCGTGA AACCCGCCGC TCCGCCGGCC
AAGGAGGCCC GCATTTTAAT CGCCGAGGAC AACCCGGTGA ACCAGAAGGT CACGCTCCTG
CAGCTGCGCA ATCTCGGCTA CCCAGCCGAC GTGGTGCCCA ACGGCCGCGA GGTGCTTGAG
GCGCTGCGCA GGAAAGCTTA CGCGCTTGTC CTGATGGACG CGCAAATGCC GGAGATGGAC
GGCGTCGAGG CGACACGGAA GATTCGCGAA GCACAGGCCG CCGGCGACCG TACGATCCCC
TCGCCGCTGC GCATCATCGC CATGACCGCG AACGCGATGA CCGGCGATCG CGAACTCTGC
CTCGCTGCAG GCATGGATGA CTACCTTGCG AAGCCCGTGA AACCGGGCGA TCTGCGAGAC
ATGCTCGCGC GTTACCTGCC CGACGAGGCG ACCGCGACGC CCGCCGTTTC CAGCTGA
 
Protein sequence
MPSTPPRPPT ARSNRVLVID DNPSIHEDVR KILCPSVTET GSNLDALEAE LFGAPDAPAT 
AKRDMPSFTV DCAHQGQEGL ALVKKATAEG QPYAMAFVDM RMPPGWDGVE TTLEIWKVAP
DLQIVICTAY SDYSWDDLLA KIDGSDRLVI LKKPFDTIEV LQLANALTAK WNLLQETKAN
ADELEARVRA RTAELESANA LLHEEIGRRM LVELDLKRAK DAAEAADRAK SVFLANMSHE
IRTPMNGVLG MANLLLATPL NPEQHDLAET LCQSGESLLT IINDILDFSK IEAGRMELEA
IDFDLADNLE LALDLHAEAA ARKHLELVVN IDPAVPRHVR GDPGRLRQIL LNLVGNAIKF
TEKGEVVVKV TVDHNWPNRV LLRFAVTDTG IGIPEWVQEK LFQPFVQADT STTRRFGGSG
LGLVICKRLA ELMSGSIGVE SKPNEGSTFW FTVELKHAFH PVTVGVVPLS TLRGHHALIV
DDNATNRSLL KHLCNAWSLR HSVMESVDEA LVELHRATAA GTPFDLVITD HHMPGRDGLD
LAAAINRDTT IPRPALVLLT SRGERLPQSQ LDEYRFAACE LKPVHARSLH TTLARVLAHI
RPGVPALPDG NGVKPAAPPA KEARILIAED NPVNQKVTLL QLRNLGYPAD VVPNGREVLE
ALRRKAYALV LMDAQMPEMD GVEATRKIRE AQAAGDRTIP SPLRIIAMTA NAMTGDRELC
LAAGMDDYLA KPVKPGDLRD MLARYLPDEA TATPAVSS