Gene Oter_3876 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3876 
Symbol 
ID6207429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5033667 
End bp5034206 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content65% 
IMG OID641693544 
Producthypothetical protein 
Protein accessionYP_001820750 
Protein GI182415684 
COG category[R] General function prediction only 
COG ID[COG2151] Predicted metal-sulfur cluster biosynthetic enzyme 
TIGRFAM ID[TIGR03406] probable FeS assembly SUF system protein SufT 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.107724 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0166162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCGAATC ACGTTCTCCA ACGCGCCACG CCGGCGACGA TGATCCCCGC GGGCGACGCT 
ACCACGCTGC CCGCCGGGAC CGAAGTGCAC ATCGTCCAGA CCCTGGGCGG CAACGTGACC
GTGCGCACGG ATCACGGGCT GTTCCGGATC GCCGCCGAGC ATGGGGACGC GATCGAAGGT
TATGTGCCGA AGTCCGCGAG TGTCGGCGGC GAGCCGGTGC AGGGCGAGTT CAGCGAGCAG
ATGGTGTGGG ATGCGTTGAA GACCTGTTTC GATCCGGAGA TTCCGGTGAA CATCGTCGAT
CTCGGACTGG TGTACGATCT TGCGGCGGAG AAGACGCCGA CGGGCGGCTT TGCGGTCGAG
GTGAAGATGA CGCTGACCGC CCCGGGTTGC GGAATGGGTC CGATCATTGC CGAGGACGCG
CGCGAGAAGA TTGCGCGGCT CCCGCAGGTG GAAGCGGCGA AAGTGCACAT CGTCTGGGAT
CCCGTGTGGA CGCCGCAGAT GATTTCGACC GAAGGCCGGC AGGTGCTCGG GTTGGAGTAG
 
Protein sequence
MSNHVLQRAT PATMIPAGDA TTLPAGTEVH IVQTLGGNVT VRTDHGLFRI AAEHGDAIEG 
YVPKSASVGG EPVQGEFSEQ MVWDALKTCF DPEIPVNIVD LGLVYDLAAE KTPTGGFAVE
VKMTLTAPGC GMGPIIAEDA REKIARLPQV EAAKVHIVWD PVWTPQMIST EGRQVLGLE