Gene Oter_3874 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagOter_3874 
Symbol 
ID6206563 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameOpitutus terrae PB90-1 
KingdomBacteria 
Replicon accessionNC_010571 
Strand
Start bp5031836 
End bp5032309 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content61% 
IMG OID641693542 
Producthypothetical protein 
Protein accessionYP_001820748 
Protein GI182415682 
COG category[S] Function unknown 
COG ID[COG1259] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.171656 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0361248 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGAATG ATGCCGTCAC CGTGACCGTG AAAGGCGTGA TGCCGACCGC CAACGGCTGC 
GCCGTGTTTC TCGGCAACGA CGGCAAGACG TTCGTGATCT ACGTCGATCA TTCGGTCGGC
AACGCCATCC AGATGACGCT TAATGGCGTG AAGAAAGAGC GCCCGCTGAC GCACGATTTG
ATCGGCAGCA TTTTTCTCGG CTTGGGCGCC CACCTCGAGC ACGTGCTCGT CAATGACGCT
CGCGACGGCA CGTTCTTCGC CCGCATCCTG CTCAAGATGG AGAACGAACT TGGCAAGAAG
ATCGTCGAAA TCGACGCGCG GCCGAGCGAC TCGATCGTCC TCGCCCTCCA GCAGAAACGG
CCGATCTTCG TCGCCCGCGC GGTACTCGAC GCCGTCGAGG ACATGACCGA GATCCTCGAA
CGCGTGCGCC AGCAGCAGGC CGAGGAACCC GGCGAGGAAG AGGAAAATCC CTGA
 
Protein sequence
MQNDAVTVTV KGVMPTANGC AVFLGNDGKT FVIYVDHSVG NAIQMTLNGV KKERPLTHDL 
IGSIFLGLGA HLEHVLVNDA RDGTFFARIL LKMENELGKK IVEIDARPSD SIVLALQQKR
PIFVARAVLD AVEDMTEILE RVRQQQAEEP GEEEENP