| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3864 |
|---|
| Symbol | |
|---|
| ID | 6205847 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 5016868 |
|---|
| End bp | 5017851 |
|---|
| Gene Length | 984 bp |
|---|
| Protein Length | 327 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 641693532 |
|---|
| Product | phage SPO1 DNA polymerase-related protein |
|---|
| Protein accession | YP_001820738 |
|---|
| Protein GI | 182415672 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1573] Uracil-DNA glycosylase |
|---|
| TIGRFAM ID | [TIGR00758] uracil-DNA glycosylase, family 4 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.0209903 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACCACG CACTCACGGC GCTCACTGAC GAACTGCGGC GACTCAAAGC CGCAGGCGTG
AAGACGGTCG TCGTGTCCGA CGACAGCGTA GCCGCATTGC GCCGCGCGGT GGCGAAGCGT
GGGCATGGGA CGCCAGCCAA GACCGTTGCC GAGCGCGTTG AGCCCAGCCC GGGGTCGCCC
TCCATCGCTG AAGCTACGGA GGGCAGGCCG ACCCTTGCCA CACCCGAGCC GGATCGCGGT
ACGGTCACCC CGCCTGTGGG GGATCGCGCG CCGGCTGAAA CTGAGGCACC CGTGGCAAGA
GCGGCCACGA TTCCCGCGCC GAAACCCTTC ACGCTGCCGG AGGGCGACAA GGCCGCGCGG
TTTGCGGCGT TGCGGGAGCA CGTGCTGGCG GATGCGGTGT GTTGCGCCCA CGTCCGGCCC
GGCAAAAAGG TGGTGCTGGG CGTGGGGAGC CTCGAGGCGA AGATCATGTT CGTCGGGGAA
GCCCCGGGCG CGGAAGAGGA AATTCAGGGT GAACCTTTTG TCGGTCCCGC AGGACAATTG
CTGACCAAAA TGATTGGCGC AATGGGACTA CGACGTGACG AGGTTTACAT CGGCAACATC
ATGAACTGGC GGCCGGAGAT GCCGGTCAGC GCGAGCGGCG TGCAGTACGG CAACCGTCCG
CCGAATGGCG AGGAGATGAA TTACTGCCTG CCGTATTTAC GCGCGCAGAT CGAGATCGTG
AATCCGGAGG TACTCGTGGC GCTGGGCTCG ACCGCGGCGC AGGGCTTGCT CGGTATCGGA
TCGTTCAAGG CGCTCGGCGA AGTGCGGGGG CGCTGGCACA CGTTTGCCGA CAAGCCGCTC
ATGGTAACCT ACCATCCCAG CTACATCCTC CGCAATCAGT CGAACCGCTC GAAGCGGATG
ATCTGGGAGG ATCTGTTGAA GGTGATGGAA CGCGCCGGAC TGCCGATTGC AGAAAAACAA
CGCGGATATT TTTTGGACAA ATGA
|
|---|
| Protein sequence | MHHALTALTD ELRRLKAAGV KTVVVSDDSV AALRRAVAKR GHGTPAKTVA ERVEPSPGSP
SIAEATEGRP TLATPEPDRG TVTPPVGDRA PAETEAPVAR AATIPAPKPF TLPEGDKAAR
FAALREHVLA DAVCCAHVRP GKKVVLGVGS LEAKIMFVGE APGAEEEIQG EPFVGPAGQL
LTKMIGAMGL RRDEVYIGNI MNWRPEMPVS ASGVQYGNRP PNGEEMNYCL PYLRAQIEIV
NPEVLVALGS TAAQGLLGIG SFKALGEVRG RWHTFADKPL MVTYHPSYIL RNQSNRSKRM
IWEDLLKVME RAGLPIAEKQ RGYFLDK
|
|---|
| |