| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3859 |
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| Symbol | |
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| ID | 6204663 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 5010147 |
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| End bp | 5011853 |
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| Gene Length | 1707 bp |
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| Protein Length | 568 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 641693527 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001820733 |
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| Protein GI | 182415667 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.123854 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCAAACC CAAGAAGTAG CACCTTTCTC ACGGCCATTC GCAACCGGCC GAACTTCGAC
TACACGCAGG AGCTCGCGGC GCTGGTCGAA CGCCACGGCG TCGGCGTCGA GCTCGTGGAA
GCGCTGATCG ACGAGAAGAT CCTGCCGAAG GAGGATGTCT GCAAATCCTG GGCCGACTCG
CTCGGCGTGG CCTATGTCGA TCCTTTTGCC TCGGTGATTA CGGACGAAGC CGTGGAGCGG
ATACCGGTGG AAATCGCGCG CAAGACCCGC GCGATCGGCC TGTATGTGGT GCAGGGCGTC
CTGACCGTGG CCCTGGCCAC GCCACTCGAG ACCGAACTGG TCAAGCGGCT CGGCCAGATC
GCGCAGATGC CGATCAGCCC GGTCTTCGCT CTGCCCCGCG AAATCGAAGA CGCCATCTCG
ATCCACTACT GCACGGAGAA AAACCTCGAG GAAAGCCTGA ACGAGCTCGA GAGCTCGAGC
TTGTTCGACA AGCCGGACTT GGTCGGCGAC AAGCTCGCGG CGCTGGCAGA AAACAACTCC
CTGACGCAGA TCCTCGACGA GATCATCTAC TTTGCGCTCC GCGAGCGCGC GACGGACATC
CATATCGAGG CGCAGGAGAC GCAGAGCCGG ATCCGCTTCC GCATCGACGG CAACCTGCGC
GAGATCCTCA CCTATTCGCG CAAGCTGCAC CGCGCCGTCG TCTCCCGGCT GAAAATCCTC
TGCGGCCTGA ACATTTCGGA GTCGCGCTTT CCCCAGGACG GCCGGTTTTC GATGCCGATC
GGCAGCCAGT CCGCGAACTT TCGCGTCTCG ACGATTCCCT CCGCCTACGG CGAGAAGGCG
GTCGTCCGCA TCCTCGCGCT GACCGGCAAG AAATCGATGC TCACGCTGGA CAAGATGATG
ATCTCCCAGA CCGTCCTCCA GCCGTTCAAG CGCCTCATCC AGAATCCGAA CGGGATCATC
TTCGTCACGG GCCCGACGGG CTCGGGCAAA ACGACCACGC TTTACGCCGC GCTGCACGAG
ATCAACTCGC CCGACCTCAA CATTTCCACA ATCGAGGACC CCATCGAGAT CCAGCTTCCG
GGCGTCACGC AGACGCAGGT CAACGCCCAC ATCGACCTCA AGTTCGCCAC CATCCTGCGC
GCGTTGATGC GCCAGGACCC GGACGCGATC CTGATCGGCG AGATCCGCGA CTTGGAAACG
GCCAAGATCG CGACCGAAGC CGCGCTCACC GGCCACATCG TCTTTGCCAC ACTGCACACG
AACACGGCGG CGCAAGCGAT TGTGCGGCTG ATCGAGATCG GCGTGGAGCC CTACATGGTC
GCGCCCACGG TTATCGGCGT GCTCGCGCAG CGACTCGCCG CCCGGATCTG CGACAACTGC
AAGGAAGCGT ATTACCCGAC ACGCGACGTG CTGCGCCGCT ATTTTGCCGA CGAAGGACTC
ACCGACGTGC CGTTCTACCG GGGGCGCGGC TGCACCGCGT GCCGCGGCAC CGGCTACAAG
GGCCGCGTGG CTTTTCACGA ACTGGTGCTG ATCACGGAGG AGATCCGCAC CCTGATCGCA
GAAGGCAAGA GCGCGCAGGA AATCACCCGC GCGGCCGCGA AAGTCGGCTA CAAGCCTTTG
CGCTACGACG GGCTCAAGAA GGTGCTGCTG GGCCTCACGA CGATCGAGGA GATCGATCGC
AACACCTCAT TCGAGTGGTC GGCGTAG
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| Protein sequence | MSNPRSSTFL TAIRNRPNFD YTQELAALVE RHGVGVELVE ALIDEKILPK EDVCKSWADS
LGVAYVDPFA SVITDEAVER IPVEIARKTR AIGLYVVQGV LTVALATPLE TELVKRLGQI
AQMPISPVFA LPREIEDAIS IHYCTEKNLE ESLNELESSS LFDKPDLVGD KLAALAENNS
LTQILDEIIY FALRERATDI HIEAQETQSR IRFRIDGNLR EILTYSRKLH RAVVSRLKIL
CGLNISESRF PQDGRFSMPI GSQSANFRVS TIPSAYGEKA VVRILALTGK KSMLTLDKMM
ISQTVLQPFK RLIQNPNGII FVTGPTGSGK TTTLYAALHE INSPDLNIST IEDPIEIQLP
GVTQTQVNAH IDLKFATILR ALMRQDPDAI LIGEIRDLET AKIATEAALT GHIVFATLHT
NTAAQAIVRL IEIGVEPYMV APTVIGVLAQ RLAARICDNC KEAYYPTRDV LRRYFADEGL
TDVPFYRGRG CTACRGTGYK GRVAFHELVL ITEEIRTLIA EGKSAQEITR AAAKVGYKPL
RYDGLKKVLL GLTTIEEIDR NTSFEWSA
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