| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3838 |
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| Symbol | |
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| ID | 6204993 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4986100 |
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| End bp | 4988913 |
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| Gene Length | 2814 bp |
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| Protein Length | 937 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 641693505 |
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| Product | alanyl-tRNA synthetase |
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| Protein accession | YP_001820712 |
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| Protein GI | 182415646 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0013] Alanyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00344] alanine--tRNA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.894742 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTTCCG CCGAGATCCG CCAGAGTTTT CTAGATTTCT TTGCCCGCCA AGGACACACG
ATTGTGCCTT CGTCGTCGCT CCTGCCGGAC TCGCCCGGAC TGCTGTTTAC GAACGCGGGG
ATGAACCAGT TCGTGCCCAT CTTCCTCGGT GATCGCGCGC CGGACGTCTC GAAATGGGCT
GGCGCCCGCC CTGCGAAGGA CACCCGCGCG GCCGACACGC AGAAATGCAT CCGCGCCGGC
GGCAAGCACA ACGACCTCGA GGACGTTGGC TTCGATACCT ATCACCACAC GATGTTCGAG
ATGCTGGGCA ACTGGTCGTT CGGTGACTAC TTCAAGAAGG AGTCGATCAC CTGGGGCTGG
GAGCTGATCA CGAAGGTCTG GGGCATTCCG GCGAAACGGC TTTTCGCGAC CGTCTACTCA
CCCGACAAAT CCAAGAACGA TCCCTCCGAC TTCGACCAGG AAGCTTACGA CATCTGGGCC
GGGGTTTTCA AAAAGGAAGG CCTCGATCCC GCCGTCCACA TCGTCCACGG CAACAAGAAG
GACAATTTCT GGATGATGGG CGATACCGGC CCCTGCGGCC CGTGTTCGGA AATCCATTTC
AACCTGCTGC CGTCCGACGA TGAAGTGGAA GGCCGAAAGC TCGTGAACGC CGGTGTCCCT
CGCTGCATCG AGATCTGGAA CCATGTCTTC ATCCAGTTCA ACGCGAACGC CGACGGCACG
TTCTCGCCGC TCGCCGCGAA GCACGTCGAT ACCGGCATGG GCTTCGAGCG CGTCGCCGGA
ATCTACGCGA CGACGAAGGG CTTCAAAGAC TTCTCGCGCG ATCCGTCGAA CTACAACGCG
GACGTGTTCG CGCCGTTGTT CGCCAAGATC GAGGAACTCT CGAAGAAGAC CTACAACGGC
ACCGTGCCGA CGCGCCGCGA AGGGCTCGGC GAACAGGAGA ACATCGACAT CGCGTTTCGC
GTGCTTGCGG ACCACGCGCG CTGCGTCTCG TGCGCGATCG CCGACAACAT TCTTCCCGGC
AACGAAGGCC GGAACTACGT CATCCGCCGG ATCCTTCGGC GCGGCATTCT CTACGGCAAG
AAGCTGAATC TCGCGACCGG TTTCTTCGAA CAGCTCGTCG CGCCGGTGGT TGAGTCGTTG
GGCGCGGTGT TCCCCGAACT GAAGGAGCGC CAGGACATCA TCCGCCGCGT GATCCGCAGC
GAGGAGGAGT CGTTCGGCCG GACGCTGGAA AAAGGTCTCC AGCTGTTCAA TGAAGGCGCA
AAACTTCTCC TAGATGCACA TCCAATCAAA GGCCAAGCCG ACGTCCCGGG TGTTGGCACC
ATTACCAACA TAGGAGGTGT AACACGTTTT TTGGGCGGGA AGTTTGTATT TCGCTTGTAC
GATACCTACG GTTTTCCTGT GGACATGACC CAGCTTCTCG CGACCGAGCG AGGACTGGCA
GTAAACATGG TGGAGTTCGC GAGCGAAATG CAGCAACAGC AAGATCGCTC CCGCGCCGCG
CAGAAGAAGG AAGTGATCGT CGCCGCCACC GAGGGCGACA ATACTGAGGC TGCGCAGCCG
ACGAAGTTCA TCGGCTACGA CCGGCTCACC GCGGACGCGC AGGTGCTCGA CGTCGTCAAA
ACCGACAAGG ACCTGTTCCT GGTCTTCGAT CAAACTCCGT TCTACGCGGA GATGGGCGGC
CAGACCGGCG ACCACGGCGT GGTGAAGATC GACGGACAGA CCTTCGCGAT TCTGGCGACG
GTGAAGGACA AGGCCGGCCG GTTCCTGCAC AAACTCGCGC CCGCGTGCGC GGCCGATGTC
GCGCGACTGA ATCCCGTCGG CAAGAAGGCC GCGCTCGGCG TTTCGCCGCT CGCGCGCCGC
GCGATTTCAC GCCACCACTC CGCCGAGCAC CTCGTGCACT GGGCGCTGCG CAAGACGCTC
GGCACGCACG TCCGGCAGGC CGGCACGTCG AAGACGAAGG AGCGGATGCG CTTCGATTTC
ACCCATTTCG AGGCGCTCAC CCCCGAGCAG ATCGCGGAAG TCGAGCGGCT CGTGAACTCG
AAGATCCTCT CGAACGACAA GGTCGAGGCC TACGAGACCG AGTTCGACAA GAAGCCCGAG
GGCACGCTCG CGTTCTTCGG CGAGAAATAC GGCAAGATCG TTCGCGTCGT CGACATCGGC
GGCTACAGCC GCGAGCTCTG CGGCGGCACG CACGTGTCCA CCACGAGCGA AATCGGGCTG
TTCAAGATCG TCGCCGAGAT GGCGATCGCC GCGGGCACGC GGCGCCTCGA AGCCGTCGCC
GGCCAGGCCG CCTACGATTT CGTCGAGGAA CACGAGACCG CGCTCAAGGC GGTCACGCAC
AAGCTCAACG CCGGTCCGCA GGACGTCGCG CAAAAACTCG ACTCGCTACT CGCGCACCAG
AAGGAGCTCG AGAAAAAGCT GAAAGCCTAC GAACAGAAAG CCGCCGCCGG ACTCGCGGAC
GAACTCGCCG CGAAAGCGAC TGCGCGCGAC GGACTCAAGT TCGTCACTGC GACGGTCAGC
ATCGACAATC AGGATGCGCT CCGCTCGCTC GGTTCTCAGG TGCTGCACAA GCTCGGCGAA
GGCGTGGTCA CGCTCGGCGC CGCGCTCGGC GATCGCGCGA GCCTCGTCGT TTACTGCTCG
CCCGCCGCCA TCAAAGCGGG GCATCAGGCC GGCAAGATCG TCGGCGAACT TTCCACCAAG
ATCGGCGGCA AAGGCGGGGG CAAGCCGGAC TTCGCCATGG GCGGCGGCAA GGATCCGTCC
AAGCTCGCCG ACGTGCTGAA GCAATCCGCG CCTGGCGTGA TTTGTTCCTG GTGA
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| Protein sequence | MTSAEIRQSF LDFFARQGHT IVPSSSLLPD SPGLLFTNAG MNQFVPIFLG DRAPDVSKWA
GARPAKDTRA ADTQKCIRAG GKHNDLEDVG FDTYHHTMFE MLGNWSFGDY FKKESITWGW
ELITKVWGIP AKRLFATVYS PDKSKNDPSD FDQEAYDIWA GVFKKEGLDP AVHIVHGNKK
DNFWMMGDTG PCGPCSEIHF NLLPSDDEVE GRKLVNAGVP RCIEIWNHVF IQFNANADGT
FSPLAAKHVD TGMGFERVAG IYATTKGFKD FSRDPSNYNA DVFAPLFAKI EELSKKTYNG
TVPTRREGLG EQENIDIAFR VLADHARCVS CAIADNILPG NEGRNYVIRR ILRRGILYGK
KLNLATGFFE QLVAPVVESL GAVFPELKER QDIIRRVIRS EEESFGRTLE KGLQLFNEGA
KLLLDAHPIK GQADVPGVGT ITNIGGVTRF LGGKFVFRLY DTYGFPVDMT QLLATERGLA
VNMVEFASEM QQQQDRSRAA QKKEVIVAAT EGDNTEAAQP TKFIGYDRLT ADAQVLDVVK
TDKDLFLVFD QTPFYAEMGG QTGDHGVVKI DGQTFAILAT VKDKAGRFLH KLAPACAADV
ARLNPVGKKA ALGVSPLARR AISRHHSAEH LVHWALRKTL GTHVRQAGTS KTKERMRFDF
THFEALTPEQ IAEVERLVNS KILSNDKVEA YETEFDKKPE GTLAFFGEKY GKIVRVVDIG
GYSRELCGGT HVSTTSEIGL FKIVAEMAIA AGTRRLEAVA GQAAYDFVEE HETALKAVTH
KLNAGPQDVA QKLDSLLAHQ KELEKKLKAY EQKAAAGLAD ELAAKATARD GLKFVTATVS
IDNQDALRSL GSQVLHKLGE GVVTLGAALG DRASLVVYCS PAAIKAGHQA GKIVGELSTK
IGGKGGGKPD FAMGGGKDPS KLADVLKQSA PGVICSW
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