| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3830 |
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| Symbol | mnmA |
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| ID | 6205483 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4976209 |
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| End bp | 4977345 |
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| Gene Length | 1137 bp |
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| Protein Length | 378 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693497 |
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| Product | tRNA-specific 2-thiouridylase MnmA |
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| Protein accession | YP_001820704 |
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| Protein GI | 182415638 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0482] Predicted tRNA(5-methylaminomethyl-2-thiouridylate) methyltransferase, contains the PP-loop ATPase domain |
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| TIGRFAM ID | [TIGR00420] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGCG CCGAAAAAAT TCTCGTGGCG ATGTCCGGCG GAGTCGACAG CTCCGTTGCC
GCGCTGCTGC TCAAACAGCA GGGCTACGAC GTCGTCGGCG CTTACATGAA GAACTGGATC
AATGAAGATC AGGTGATCGG ACATTGCCCG TGGCAGCAGG ACATCGAGGA TGCGCGCCGC
GTCGCCACGC AGATCGGGAT CGAATTTCGC GTCGTGAATC TGATGCGCGA GTATCGCGAG
CGCGTCGTGG CTTACCTGCT CGACGGCTAC GCTCGCGGGC TCACGCCGAA TCCGGACATC
ATGTGCAACC GGGAGGTCAA GTTCGGCGTG TTTCGCAGCT GGGCGAAGGA TCACGGTTTC
GCCGCGATCG CCACCGGCCA CTATGCGCAG CGGGTGGAGG TAAAACCCGA TCTGGTGACG
CCCGCCGTCC TCGGCGGGCT CAACGCCGAC GGGACGCCGG CGTCCACCTT TGCTCTGCTC
GAGGGCGCCG ACAAAAACAA GGACCAGTCC TACTTCCTCG CACTGTTATC GCAGGAGCAG
TTGCGCGACG CGCGTTTCCC CATCGGCCAT TTGCCCAAAC CCGAGTTGCG TCGGATCGCG
CGCGAAGCCG GGCTCGCGAC CGCCGACAAG AAGGACAGCC AGGGCATCTG CTTCATCGGC
GAAGTGAAGA TGCAGGATTT TCTGCGCGCC TACGTGCCCG ACGCGCCGGG TCCCATTGTC
CGCGCCACCG ACGGTCGCGA ACTCGGCCAG CACCGCGGGC TGCATTTCTA CACGCTGGGC
CAGCGCAAGG GGATCGGGAT TCCCTCCAAC ACCGATCACG AAGCCTACGT CGTCGTCGGC
AAGCGCGCTG CTGACCGGGC GCTGCTGGTC GCGTTCGATC ATCCAGACGC GCCGGGACTT
TTCCAGCGCG AGGTGCGCGT GCACGCGCTC AGTTGGATCG GCAAACCCGT GACGACGGCG
CGTGCGCTCG AAGGCCGCGT GCGTTATCGC GATCCGCGCG TGCCGCTCGA GTTCGTGCCG
GAAAGCGAGA CCACTGCGCT GATTCGTTTC GCCGCGCCGC AACGCGGTCT CGCGGCGGGA
CAGATCCTCG CGTTCTACGA CGGCGAGCGA CTCCTCGGCG GCGGAGTCTA CGCGTAG
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| Protein sequence | MPGAEKILVA MSGGVDSSVA ALLLKQQGYD VVGAYMKNWI NEDQVIGHCP WQQDIEDARR
VATQIGIEFR VVNLMREYRE RVVAYLLDGY ARGLTPNPDI MCNREVKFGV FRSWAKDHGF
AAIATGHYAQ RVEVKPDLVT PAVLGGLNAD GTPASTFALL EGADKNKDQS YFLALLSQEQ
LRDARFPIGH LPKPELRRIA REAGLATADK KDSQGICFIG EVKMQDFLRA YVPDAPGPIV
RATDGRELGQ HRGLHFYTLG QRKGIGIPSN TDHEAYVVVG KRAADRALLV AFDHPDAPGL
FQREVRVHAL SWIGKPVTTA RALEGRVRYR DPRVPLEFVP ESETTALIRF AAPQRGLAAG
QILAFYDGER LLGGGVYA
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