| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3814 |
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| Symbol | |
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| ID | 6206114 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4956574 |
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| End bp | 4957818 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641693482 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001820689 |
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| Protein GI | 182415623 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.14573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.243008 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCACTG CAAGCTCCAC CCGTTCCCGG CCGCTCCCGC TTCGACTGCG TCGTCCCGCG
TTCATTATTC CCACCGTGCT GTTGGGCGCC GCGCTCGCCA CCTACGCCGT CACGCACCTG
ACCGCATCGG AGCAAGCGCA GGCCGCTCCA TCCGCGCCTC CGCCACCCAA GGTCACGGTC
GCGCCGGTCG AACGCCAACT CGTCACCGAC TACGAAGAAC TCACCGGCCG CGTCGACTCA
ATTGAAACGG TCGATCTGCG CGCACGCGTC TCGGGGCACA TCCAAGATGT GCGTTTCCAG
GCCGGTGAGA TCGTGCACCG TGGCGATGTG CTGTTCACGA TCGATCCGCG CTGGTATCGC
GCCGAGTTCG ACCTCGCACT CGCCCGGGCC GACCAGGCGC GAGCGCAAGC GGAGGTGGCT
GACAGCGAGG CGCGTCGCGC GAATGAACTG CTCGCGGTCG CTGCCGTCTC GACCGAAGAG
GCCGAAGCCC GGCGCACGCG GGCGCACGTC GCCCGCGCCG CCGTGGCGTC CGCCGAGGCC
GCACTCGCAA CCGCGCGGCT GAACCTCGAG CACACGGAGG TCCGCGCACC GATCGATGGA
CGGATCAGCC GCGCCCTCGT CACCGCCGGC AACCTGATCT CCGGCGCCCC CGGCGGCGCC
ACCCTGCTGG CGACGATCGT CTCGACGGGC GAGGCCTATG TGTATGCGGA CATCGACGAG
AGCACGCTGC TCAAGTTCAA CCGACTGCTC CGCGAAAATC GCCTCGCCCT CGAGAACGGC
CGCGTGCCGG TGGAGATGCA GCTGGCCGAT GAGAGCGGCT ATCCGCGTCG CGGTTACATC
GAGTCGACCG ACAACCGGCT CAATCCAGCC ACCGGTTCGC TCGCGCTCCG GCTCGTGTTT
GCCAACCGTG ATCAGGCGCT CGTGCCTGGG CTGTTCGCCC GGGTGCGCGT GCCCGTCGGC
GCGCCGCGGC CGTCGCTGCT CGTGAGTGAG CGGGCGATCG GCACGGACCA GAGTCAGAAA
TTCGTGCTCG CCGTCGCCGC GGACAACAAG GCCGTGTATC GCTCCGTCAA ACTCGGCGGC
AGCTTCCACG ACAAGCGCGT GATCCAGTCT GGGCTCGAGC CGGGCGACCG CGTGATCGTC
AACGGTCTCC AGCGTGTGCG ACCCGGCATG ACGGTGCAGC CCGAACTGCT CGCGGCAGAA
GCCACCACGC AGAACGCCAA CGCCAACCGA CTCGCGAGCC GCTGA
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| Protein sequence | MSTASSTRSR PLPLRLRRPA FIIPTVLLGA ALATYAVTHL TASEQAQAAP SAPPPPKVTV
APVERQLVTD YEELTGRVDS IETVDLRARV SGHIQDVRFQ AGEIVHRGDV LFTIDPRWYR
AEFDLALARA DQARAQAEVA DSEARRANEL LAVAAVSTEE AEARRTRAHV ARAAVASAEA
ALATARLNLE HTEVRAPIDG RISRALVTAG NLISGAPGGA TLLATIVSTG EAYVYADIDE
STLLKFNRLL RENRLALENG RVPVEMQLAD ESGYPRRGYI ESTDNRLNPA TGSLALRLVF
ANRDQALVPG LFARVRVPVG APRPSLLVSE RAIGTDQSQK FVLAVAADNK AVYRSVKLGG
SFHDKRVIQS GLEPGDRVIV NGLQRVRPGM TVQPELLAAE ATTQNANANR LASR
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