Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3809 |
Symbol | |
ID | 6204958 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4948900 |
End bp | 4949550 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641693477 |
Product | nitroreductase |
Protein accession | YP_001820684 |
Protein GI | 182415618 |
COG category | [C] Energy production and conversion |
COG ID | [COG0778] Nitroreductase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.563199 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACGCCGA TCACTCCCGA GACGCTGACC GCCGCGCTGC AGTGGCGGTA TGCAGTGAAA AAGTTCGATC CCACGCGGAA AATCCCGGCG GAAACGTGGA GCGCCCTCGA AGGCGCGTTG GTCCTCTCGC CGTCGTCGAT CGGACTGCAG CCATGGAGAT TTTTTGTCGT CACCGATCCG ACCTTGCGCG CGCAACTGCG CCCGGCTGCG TGGGACCAAT CGCAGGTGAC AGAGTGCTCC CACTTTGTCG TGTTCGCGGT GCGGAAGAAC CTGGGCGCGG AGCACGTCGA CCGGCACGTG GCCCGAATGG CGGAGGTGCG CGGGACCACG ACGGAAGCGC TCTCGCGGTT TGGCCAGATG GCGTTGCGAA ATCTCGATCA GGCGCGCGCC GAAGGCCGGC TCGACATGTG GCAGACGCAC CAGATCTACA TCGCGCTGGG CAGCTTCGTG ACGGCCGCGG CGGTGCTGGG CGTCGACACG TGTGCGATGG AAGGCTTCGA ACCGGCGAAA TTCGACGAGA TCCTCGGGCT GGCCGGAACG GATTATTCGA GTGTGGTCGC CTGCGCAGCA GGTTACCGCG ACCCGAACGA CAAATACGCT CACACGAAGA AAGTCCGGTT CAAGCGCGAG GACGTGATCG AGGAACGGTG A
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Protein sequence | MTPITPETLT AALQWRYAVK KFDPTRKIPA ETWSALEGAL VLSPSSIGLQ PWRFFVVTDP TLRAQLRPAA WDQSQVTECS HFVVFAVRKN LGAEHVDRHV ARMAEVRGTT TEALSRFGQM ALRNLDQARA EGRLDMWQTH QIYIALGSFV TAAAVLGVDT CAMEGFEPAK FDEILGLAGT DYSSVVACAA GYRDPNDKYA HTKKVRFKRE DVIEER
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