| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3808 |
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| Symbol | |
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| ID | 6206802 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4948248 |
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| End bp | 4948814 |
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| Gene Length | 567 bp |
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| Protein Length | 188 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693476 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_001820683 |
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| Protein GI | 182415617 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.56065 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTCTGCG CGCTCCACAA ACCTTACGGT GTGCTCTCGC AATTCACGCC CGAGCCCGGA
TCCCGCTGGC GCACGCTCGC GGAGTTCGGG CTGCCGCCAG CAGTCTATCC GCTAGGTCGG
CTCGATGCCG ATTCCGAGGG GCTGCTGCTG CTGAGCGACG AACCGGGATT GAATACCCGG
CTGCTCAATC CCGACCAAGC GCATCGACGC GAATACTGGG TGCAGGTGGA ACGCGTGCCC
ACCGATGCGG CGCTCGCGCA ACTGCAGCGC GGCGTGAAGA TCGGCGACTA CGCGACGCGG
CCGTGTGCTG CGCGGCGGCT CGATCCGGCG CCCACGCTGC CGCCACGCGA TCCGCCGATT
CGCGCGCGCA AGAACGTGCC CGATTGCTGG CTGGCGCTCG AACTCATCGA AGGCAAGAAC
CGGCAAGTCC GCCGGATGAC CGCCGCGATC GGCCATCCCA CACTGCGTCT GGTCCGCGTG
CGCATCGGCG ATTTCGCGCT CGGGAAACTC GCGGTCGGAC AGTGGCGGGA GCTGACGGCG
GACGAGCGGA AATCCGTCTT TTGCTAG
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| Protein sequence | MLCALHKPYG VLSQFTPEPG SRWRTLAEFG LPPAVYPLGR LDADSEGLLL LSDEPGLNTR
LLNPDQAHRR EYWVQVERVP TDAALAQLQR GVKIGDYATR PCAARRLDPA PTLPPRDPPI
RARKNVPDCW LALELIEGKN RQVRRMTAAI GHPTLRLVRV RIGDFALGKL AVGQWRELTA
DERKSVFC
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