Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3804 |
Symbol | |
ID | 6205262 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4942763 |
End bp | 4943320 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693472 |
Product | MarR family transcriptional regulator |
Protein accession | YP_001820679 |
Protein GI | 182415613 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.546626 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGTCCTTTT TGCTGCTCAA CAATCTGCCC AAGTACGAGT GCCTCCTCGC GGCGTCGAAG TCGTTTCCTG AACTCGACCC TTCCGCGACG GAGGTCTTCC TGCATTTGCT GCGCGCTGGG GATGACGCGT TTCGCGTCGC CGGCGCGCAT CTCGCCGAGC ACAACCTGTC GCAGGGCCGG TTCATGGTCT TGGTACTCCT GCACAGCAAG GCCTGCCACG GTACCCGCCC ATGCACGCCC GCCGAGCTCG CCGAGCTGGC CGGCGTGACC CGTGCCACCA TGACCGGTTT GATCGACACG CTCGAGCGCG ACGGGCTGGT CAACCGGGAG CCCGATCAAG CCGATCGCAG GATGATGCTG GTGACGTTGA CGGGCAAAGC ACGAGCGTTG TTGCAGGCCG TCATGCCGCC GCACTTCGAG CGAATGGCAT TGTTGATGCA GCCGTTGACC GAGTCCGAAC GCCAGACCCT CGTCTTGCTG CTGGCCAAGA TCACCGGCCA AGCGGCGAAG CTTGGCTCGC CGCGGGCGGA ATCGCCCCCG GTTTCCGTCG CGCCCTGA
|
Protein sequence | MSFLLLNNLP KYECLLAASK SFPELDPSAT EVFLHLLRAG DDAFRVAGAH LAEHNLSQGR FMVLVLLHSK ACHGTRPCTP AELAELAGVT RATMTGLIDT LERDGLVNRE PDQADRRMML VTLTGKARAL LQAVMPPHFE RMALLMQPLT ESERQTLVLL LAKITGQAAK LGSPRAESPP VSVAP
|
| |