| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3803 |
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| Symbol | |
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| ID | 6204686 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4941576 |
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| End bp | 4942706 |
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| Gene Length | 1131 bp |
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| Protein Length | 376 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693471 |
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| Product | RND family efflux transporter MFP subunit |
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| Protein accession | YP_001820678 |
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| Protein GI | 182415612 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.591559 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCAAGA GATTCGCCCT CACGACCGTC GCCATCATCG TTATTGTTGG CGCGCTGGTC
GGCACCAAGC TGCTGCAGTT CCGCGCCATG GCCGCTGCCG GCGCACACAT GACTCCTCCC
CCCGAGACCG TCACCTCGGC GCCCGTGCGC GAGGAAGACT GGCCCGACAC CGTGACCGCC
ACCGGGTCGG TCGAATCGGT TCAGGGCGTC ACGGTCGCCG CGGAACTGGC GGGCAAGGTC
ATGAAGCTGG CGTTCGAGCC CGGCGCATTG GTCCAGGCCG GCGATCTGCT GGTGCAACTC
GACACTTCGA GCGAAGAGGC GCAGCTGCGC GCGGCCGAGG CCTCCGCCCA ACTCGCGAAG
GCCAATTTCG ACCGTTCGCG CGACCTCATC CAAAAGGCGA CGATCTCGCA GGCCGAACTC
GACGCCGCCG ATGCGCAATA CAAGGAGGCG GTCGCCCGGG CTGATAACAT CCGCGCCACG
ATCGCCAAGA AAACGATCCG CGCGCCCTTC GCCGGCCGGC TCGGGCTGCG GCTCGTCAAC
CTGGGTCAGA TCCTCCGCGA GGGTGATGCG ATCACCACGC TGCAGACGCT CGATCCGGTC
TACGTGAATT TCTCCGTCCC ACAGCAGCGG CTGTCGGTGT TGCACCCGGG CGCGGACGTC
CGGGTGACGA CGGATGCAGC GCCGAAGGTT GTCTTCGCCG GCAAGATCAC CGCGATCAGC
CCCGAGGTGG ATGTCGTGAC GCGCAACGTG CGCGTGCAGG CCACGGTGCC GAACGTCGAG
GAACGGCTGC GTTCGGGCAT GTTCGCCAAC GTCGAGGTCG TGCTCCCCAC CGCCGAGAAA
AAGCTCATCG TCCCGGCGAC GGCCATCCTC TACGCGCCGT ACGGCGATTC GGTTTTCGTG
ATCGAAGAGA AGAAGGACCC GCAATCCGGC CAGGTGCAGC AGGTGCTGCG GCAGCAGTTC
GTTCGCCTCG GTGGCGCGCG CGGCGACTAC GTGGCGGTGA CTTCGGGGCT GAAGCCGGGC
GACCAGGTCG TGACCAGTGG CGTGTTCAAG CTCCGGGCCG GCACGCCTGT GGTCATCGAC
AACAAGCTCG CGCCCGACGC GAAGCTCGAT CCGAAACCCG CCAACACCTG A
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| Protein sequence | MIKRFALTTV AIIVIVGALV GTKLLQFRAM AAAGAHMTPP PETVTSAPVR EEDWPDTVTA
TGSVESVQGV TVAAELAGKV MKLAFEPGAL VQAGDLLVQL DTSSEEAQLR AAEASAQLAK
ANFDRSRDLI QKATISQAEL DAADAQYKEA VARADNIRAT IAKKTIRAPF AGRLGLRLVN
LGQILREGDA ITTLQTLDPV YVNFSVPQQR LSVLHPGADV RVTTDAAPKV VFAGKITAIS
PEVDVVTRNV RVQATVPNVE ERLRSGMFAN VEVVLPTAEK KLIVPATAIL YAPYGDSVFV
IEEKKDPQSG QVQQVLRQQF VRLGGARGDY VAVTSGLKPG DQVVTSGVFK LRAGTPVVID
NKLAPDAKLD PKPANT
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