| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3798 |
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| Symbol | |
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| ID | 6205539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4931702 |
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| End bp | 4932730 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 641693466 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001820673 |
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| Protein GI | 182415607 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0687] Spermidine/putrescine-binding periplasmic protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.727469 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.354571 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACTCG TTCGTTTCCT CCTCCCGCTC GGACTGGCCG CCGCGGTCAG CACCGTCTCC
GCCGCTTCCA AAAAACAGGA ACTGAATCTC TTCGGCTGGT CCGAGTATGT GCCGCAAGCC
GTGATCGACG GGTTCACCGC CGAGACGGGC ATTCGCGTGA ACTTCGAGAC GTATGCCTCC
AACGAGGAAC TGCTCTCGAA ACTCGTGGCC GGTGGCGGCG CCTATGATCT CGTGCAGCCG
TCGGACTACG CGGCCGAGGT GATGATCCGC CAAAAACTCC TCGCTCCGCT CGACCTCAGC
CAGTTGACCA ATTTGAAAAA TATCGATCCG AGCTTCCTGA AGCGGCCGCA CGATCCCGAA
GGTCGCTACA CGGTCCCCTA CATGGCTGGC ACCGTTGGGA TCGTCGTGAA CACCGACGTC
ATTAAGACCC CGATCAAGGG CTACCGCGAT GTGTTTCAAC CGGCGCACCA GGGCCGGATC
GTGGTGCTGA ATGACAACCG CGAACTCGTG ACCTGGGCGC TCTACACGCT CGGTCTGCCG
ATCAACACGA TCAACGCGGA GGCGCTCGCG AAGGTGCGGC CGGTGCTCGC GGACTGGGTG
CAGCGGGTGA AAGTGTTCGA CTCCGACAGC CCGAAGACCG CGCTGCTCAA CGGCGATGTC
GACCTCGGCA TCGTGTGGAG CGGCGAAGCG GCGATCCTCT GGAACCAGGA CAAGAAGTTT
CAGTATGTGA TTCCGGCGGA AGGCGCGCAT CAGTTCATCG ACGTGCTGGC GATCCCGGCA
GCGGCGAAGA ACAAGGAAAA CGCTCACAAG TTCATCAACT ACATCCTTCG TCCCCAGGTC
TCGAAACTGG TGTCGGCAGA TTTCCCCTAC ACGAACCCGA ATCTCGAGGC CCGCAAGCTG
CTGTCGCCGG AGGAACTGGC CAATCCCGCG AGCTATCCGC CCGCCGGCAA ACTGGAAACG
TTCCGCGACA TCGGTCGCGC CGCCGGCGAC ATCGACCGGC TGGTGACGGA CTTGAAGAGC
GGACTGTGA
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| Protein sequence | MKLVRFLLPL GLAAAVSTVS AASKKQELNL FGWSEYVPQA VIDGFTAETG IRVNFETYAS
NEELLSKLVA GGGAYDLVQP SDYAAEVMIR QKLLAPLDLS QLTNLKNIDP SFLKRPHDPE
GRYTVPYMAG TVGIVVNTDV IKTPIKGYRD VFQPAHQGRI VVLNDNRELV TWALYTLGLP
INTINAEALA KVRPVLADWV QRVKVFDSDS PKTALLNGDV DLGIVWSGEA AILWNQDKKF
QYVIPAEGAH QFIDVLAIPA AAKNKENAHK FINYILRPQV SKLVSADFPY TNPNLEARKL
LSPEELANPA SYPPAGKLET FRDIGRAAGD IDRLVTDLKS GL
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