| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3796 |
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| Symbol | |
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| ID | 6206561 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4929546 |
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| End bp | 4930628 |
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| Gene Length | 1083 bp |
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| Protein Length | 360 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693464 |
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| Product | spermidine/putrescine ABC transporter ATPase subunit |
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| Protein accession | YP_001820671 |
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| Protein GI | 182415605 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3842] ABC-type spermidine/putrescine transport systems, ATPase components |
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| TIGRFAM ID | [TIGR01187] spermidine/putrescine ABC transporter ATP-binding subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.327654 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.344897 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATGCGA TGGTCGAGTT GCACGGAGTC ACCCGCCGTT TCGGCGCCGT CGCGGCGGTG
GACAACGTCA GCCTGCAGAT CGCCGCGGGC GAGTTTCTCA CGCTGCTGGG CCCCTCGGGT
TGTGGCAAAA CCACCCTGCT GCGACTGATC GCAGGATTCG ACACGCCGAC GAGCGGGGAG
GTGTGGATCG AGGGCACGGA CGTTTCGCGG CTGCCGCCGT ATCGGCGACC GGTGAACCAG
GTTTTTCAGA GCTATGCGCT CTTCCCGCAT CTGACGGTCG CGGAGAATGT GGGCTTCGGC
CTAAAAATGC AGCGGGTGCC GAAAGCGGAG GCCGCCGAGC GCGTACGGCA GACGCTCGAA
CTCGTGTCGC TGACCGGGCT CGACGCGCGG CGGCCGCACC AGCTTTCGGG TGGACAGAAG
CAGCGCGTGG CGCTCGCGCG TGCGCTCGTC TGCCGGCCGA AAGTGCTCTT GCTCGACGAG
CCGCTGTCGG CGCTCGATGC GAAGCTGCGG CTGACGATGC AACTCGAGCT GAAGCGGCTG
CAACGGCAGC TCGGGATCAC GTTCGTGTTT GTCACGCACG ACCAGGAGGA GGCATTGACG
ATGAGCGATC GGATCGCGGT CGTGAACCGC GGCAGAATCG AGCAGCTCGA CACGGCACCG
GAGATTTATC ACCGGCCGGC GACGCCCTTC GTCGCGGATT TCGTCGGCCA GGGCAACCTG
CTCGCGGCGG AGCGCGTGGC CATGGCGGGG TTCGATGTGC GCGTGCGACT GGCGGGCGGG
CTTGAGGTGC TGGTGCCCGC GAACAACTGG CCGATGGAGC TTTCGCGGGC GCTGATCTCG
ATCCGGCCCG AGAAGGTTCA CGTGTCTCGG CTGCCCATCG CGGCATCGAA TTCGTTCGCC
GTCGAGGTGA AGGAAGAGGT GTTCCGCGGC GCGACCGATC ACCTGGTGCT GGTGACCGAC
ATTGGCACGC GGCTCAACGC CGTCGTGGCG AACGAGAGCG AGCTGGGCGA CATCTTTCAC
GCGGGCGACA GCGTGTTCTG CGCGCTGCAT CCGGACGACC TGGTCGTCGT CCGAGCGGAG
TGA
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| Protein sequence | MNAMVELHGV TRRFGAVAAV DNVSLQIAAG EFLTLLGPSG CGKTTLLRLI AGFDTPTSGE
VWIEGTDVSR LPPYRRPVNQ VFQSYALFPH LTVAENVGFG LKMQRVPKAE AAERVRQTLE
LVSLTGLDAR RPHQLSGGQK QRVALARALV CRPKVLLLDE PLSALDAKLR LTMQLELKRL
QRQLGITFVF VTHDQEEALT MSDRIAVVNR GRIEQLDTAP EIYHRPATPF VADFVGQGNL
LAAERVAMAG FDVRVRLAGG LEVLVPANNW PMELSRALIS IRPEKVHVSR LPIAASNSFA
VEVKEEVFRG ATDHLVLVTD IGTRLNAVVA NESELGDIFH AGDSVFCALH PDDLVVVRAE
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