| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3791 |
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| Symbol | |
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| ID | 6204625 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4924321 |
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| End bp | 4925121 |
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| Gene Length | 801 bp |
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| Protein Length | 266 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693459 |
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| Product | RNA-binding S4 domain-containing protein |
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| Protein accession | YP_001820666 |
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| Protein GI | 182415600 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
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| TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.0938115 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGTTCGT TCGAGCCCAT CCGTCTGCAA AAATACCTGG CCGACGCGGG CGTGTGCTCG
CGCCGCGCCG CCGAAGCGCT CATCGCCAGC GGTGAGGTGT GGGTCAATGG CGCTCCGGCC
CAGGTCGGGC AAAAAGTCAC GCCTGGCGTC GACCGCGTCA CCACCGGCGG CAAGCCCGTC
CGGACCACCG CCCAGCCGCG CGTGACCCTC GCGATGCACA AGCCCCGCGG GCTCGTCTGC
ACCAACGAAG ATCCGCACAA CCCGGAAACG ATCTTCTCCG TGCTGCCGCG CGAGTTCGCG
AAACTGCGCT TCTTCTGTGC GGGCCGGCTC GACAAGGACA GCGAGGGTCT GGTGATCCTC
ACGACGGACG GCGATCTCGC GCACCGGCTG ATGCACCCGT CGAACCTCGT GGTAAAACGC
TACCACGTCA CGTTGGAGAA ACCATTTCCC GCGAAGCGGC TGCCGTTGCT GGTCAAGGGC
GTGATCGCGC AGGGCGAGCG GCTCAAGGTG GAGCGGGCCG CGCTGATCAA CCCGTCCGTC
AGCCACGAGG CGACGAACCT CGACGTGCAC ATGCATCACG GCAAAAAGCG CGAGATCCGG
CTGCTGTTCA CCGAACTCGG CTATCCCGTG AAGCGGTTGC GCCGGTATCA GATCGGCGGC
TTCCGCTTGA AAGGCATCCC GCTCCGCGCC ATGAAAAAAA TGTCGCCGGC GGAGATCGAG
TCACTCTTCC GGGTGCCGCG CACTCCGCAC GCGGCGATCG AAGTCACCGC CGAATCCTTT
GCCTCTCATC ATGCAGACTA A
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| Protein sequence | MRSFEPIRLQ KYLADAGVCS RRAAEALIAS GEVWVNGAPA QVGQKVTPGV DRVTTGGKPV
RTTAQPRVTL AMHKPRGLVC TNEDPHNPET IFSVLPREFA KLRFFCAGRL DKDSEGLVIL
TTDGDLAHRL MHPSNLVVKR YHVTLEKPFP AKRLPLLVKG VIAQGERLKV ERAALINPSV
SHEATNLDVH MHHGKKREIR LLFTELGYPV KRLRRYQIGG FRLKGIPLRA MKKMSPAEIE
SLFRVPRTPH AAIEVTAESF ASHHAD
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