| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3783 |
|---|
| Symbol | |
|---|
| ID | 6204968 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4915470 |
|---|
| End bp | 4916774 |
|---|
| Gene Length | 1305 bp |
|---|
| Protein Length | 434 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 641693451 |
|---|
| Product | carboxyl-terminal protease |
|---|
| Protein accession | YP_001820658 |
|---|
| Protein GI | 182415592 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0793] Periplasmic protease |
|---|
| TIGRFAM ID | [TIGR00225] C-terminal peptidase (prc) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTAGAC GGATCCTCGT GCTCGCGGTG GGCGTCGCGT TGGGCTTTGC GCTCACGGTG
ACGGCGGCCC GGCTTTCACT TGCGTGGAGC TGGTGGCCTA ATCGCGAGCT CAACCGCTCC
ACCGACTATG TGCGCGACGT CCTCCGGATG GTGAATGAAA ACTATGTCGA CGCGGGCCGC
GCGGGCTACC GTCAGCTGGC GAAACAGGCG GTGCACGGCA TGGTCGAGTC GCTCGACCCA
CATTCGGAAT TCTTGGAGCC GGGCGATTTC GACGAGCTGG AGGAACAGCT GACCGGCGAC
TTCAGCGGCA TCGGCATCCA GGTCGAACTG CGCAAAGGTC ACGTACTCGT CATCGCGCCG
ATCGCGAACT CACCGAGCGA GCGCGCGGGC GTCCAGCGCG GCGACGAGAT TCTGAGTGTT
GACGGCAAGG GGCTGGACAA GGAGTCGCCG ATGGAGGGCG TGATCGAGAA CCTGCGGGGC
AAACCCGGCA CGCAGGTGAC GATCGAGCTG TTGCGCGCGA GCACGGGCCA GCGGTTCCGA
CACACGCTCA CGCGTGAGCT GATCCAACTC GAGAGCGTGC GCGCGCCGCA GGTGCTCGCC
GATCACACGG GCTACATCCT GATCACCGAT TTTTCCGAGC GCACCGGCGA GGAGTTTGGC
CGGGCGTTGG ACACGCTGCT GCAGGAGGGC GTTGACAGCC TGGTGATCGA CTTGCGCAAC
AATCCCGGTG GACTGCTCGA TGCCGCGGTT GCCGTGGCCG AGCCGTTTTT CCGGCGAGGC
GAGTTGATCG TCTACACGCG CGGCCGCAAG GCGATCGACT CGGAGAGCTT TCACGCGGAA
GTCGACGGCG AACCGCTGGA CCTGCCGGTC GTTGTGCTCA TCAACGCCGG CACCGCCAGC
GCAGCCGAGG TGGTGACTGG GGCCTTGAAG GACACGGGCC GTGCAGTCGT GCTCGGCGAG
CGGTCGTTCG GCAAGGGCTC CGTGCAATCG ATCTTCAAGC TCAACGACGG CGAGGGCCTG
CGGCTGACCA CCGCGCGCTA CTTCACGCCG AACGGCATCA GCATTCACGA GAAAGGCATC
GCGCCGCACG TGGAGCTGGT GCTGTCGCCG GAGGAGGACA GCAAGCTGCG CGTGCAGCGC
ACGCGGCCGG ACGTGACGGA TCCGGCCGAG TTCAAAGCTC GGTTCGGCTT CACGCCGATC
GAAGACCGGC AACTCGCGGC GGCGCTCGGC GTGCTCCGTG GCATCAAGCT GCTGGATCAG
CGGCGCACAG TGGCCGCGGC GGGCGAGCCG GTGGCGCACC GATGA
|
|---|
| Protein sequence | MFRRILVLAV GVALGFALTV TAARLSLAWS WWPNRELNRS TDYVRDVLRM VNENYVDAGR
AGYRQLAKQA VHGMVESLDP HSEFLEPGDF DELEEQLTGD FSGIGIQVEL RKGHVLVIAP
IANSPSERAG VQRGDEILSV DGKGLDKESP MEGVIENLRG KPGTQVTIEL LRASTGQRFR
HTLTRELIQL ESVRAPQVLA DHTGYILITD FSERTGEEFG RALDTLLQEG VDSLVIDLRN
NPGGLLDAAV AVAEPFFRRG ELIVYTRGRK AIDSESFHAE VDGEPLDLPV VVLINAGTAS
AAEVVTGALK DTGRAVVLGE RSFGKGSVQS IFKLNDGEGL RLTTARYFTP NGISIHEKGI
APHVELVLSP EEDSKLRVQR TRPDVTDPAE FKARFGFTPI EDRQLAAALG VLRGIKLLDQ
RRTVAAAGEP VAHR
|
|---|
| |