| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3763 |
|---|
| Symbol | |
|---|
| ID | 6206128 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | - |
|---|
| Start bp | 4891315 |
|---|
| End bp | 4892733 |
|---|
| Gene Length | 1419 bp |
|---|
| Protein Length | 472 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641693430 |
|---|
| Product | exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| Protein accession | YP_001820638 |
|---|
| Protein GI | 182415572 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG2148] Sugar transferases involved in lipopolysaccharide synthesis |
|---|
| TIGRFAM ID | [TIGR03025] exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.234034 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCACGA CCCGGGCGCG CGGCCTGGCC AATCTTCACG CGGGCGCCAT CACGCTGTTC
ATCGGCGTGT TTTTCTGGGT CTACGCGAAC GTGATCTATC ACGTGCCGTT CGTGCGGCTG
AGCCGCTCGG TCAACCTGCT GCCGTATTTC CTCTGCATGG TTGGCGGCGT GCTGTTGTCC
TCGCGCGATC TCACCCGGCT GGCGGCGCGG TTTCACTTGC TGAACTGGAC CGATGCGGCG
CGGCTGGCGG GCCGGCAGAC GGCGCTGATG GCGTTGCTGA CGTTCACGAT GATGTTCGCG
ACGCAGGATC GCAGCATCAG CCGGCTGTTT CTCGGCAGTT TTCTGGTCTG GAGCTGGCTC
GGACTGACGC TGCTGAACGC CCGGCTGCCG CAGCTGCTGG CCCGAATCAT GTTCGCGAAG
GGCCAGCGGC TGCCGACGCT GTTCATCGGC CGGCTGAGCT CGCTGTCGCG GCTGAACGAC
TGGATCGTGC ACAAGGAGCC GCTCGGTATC CATCCCGTGG GCGTCCTCTC CGATGACGAT
CCGCCTGCGG GTGAGCCGCC GGGCGGTGTG CCGTGGCTTG GCCGGGTCGC GGAGCTGTCG
CGCATGCTGC GCGAACGCGA CGTTGCGCAG CTCGTGCTGT TGGAGTTTCC GGCGACCGAT
GCGGCCGCGC GCGAGATCAT CGACCAATGC CAGGAACGTG GCTGCCGGCT GCTGATTCAC
AATAATATCG AGGAGCGCAC CACGCATCCG CTGGTCCCGA TCACGGAGGA GGGGCGTCAT
TTCTACACGC TGCAGGAGGA GCCGCTGGAA GATCCGGTGA ACCGGCTGTT GAAGCGGGGC
TTCGATCTGG CGATCGCGCT GCCGGTGGCG GTGCTGGTCC TGCCGCCGCT CTGCGTGTGG
GTGGCGCTGA TGCAGCGGCT GCAGGCGCCG GGGCCGCTGT TTCACGTGCG GCAGCGCCGA
GGCATGCGTG GAAACACCTT TGCGATGCTG AAATTCCGCT CGATGTATGT GGATACCGGC
GACGAAGCCG CGGAATCGCG ACAGGCGCGA CCCGATGACG AGCGGATTTT CCCGTTTGGC
CGTTTCCTGC GGCGGCGAAG TCTCGATGAG TTCCCGCAGT TCTGGAATGT GCTGCGCGGC
GAGATGAGCG TGGTCGGCCC GCGGCCGTAC ATGCCGATGC TCGACGAGGA ATTCCGGTTG
CAGACGAAAG CCTACCGGAC CCGGCATCTC GTGAAGCCGG GGATCACCGG GCTCGCGCAG
AGCATGGGCT ATCGCGGGGA GATTTTGGAA AAGGAGATGC TGAGCCGGCG GCACTCCTGG
GATGTGCACT ACATCACGCA CTGGTCGTTC TGGCTGGATC TGCAGATCAG CGTGCGGACG
CTCGCCCAGG TACTGTTTCC GCCGAAGACG GCGTACTGA
|
|---|
| Protein sequence | MITTRARGLA NLHAGAITLF IGVFFWVYAN VIYHVPFVRL SRSVNLLPYF LCMVGGVLLS
SRDLTRLAAR FHLLNWTDAA RLAGRQTALM ALLTFTMMFA TQDRSISRLF LGSFLVWSWL
GLTLLNARLP QLLARIMFAK GQRLPTLFIG RLSSLSRLND WIVHKEPLGI HPVGVLSDDD
PPAGEPPGGV PWLGRVAELS RMLRERDVAQ LVLLEFPATD AAAREIIDQC QERGCRLLIH
NNIEERTTHP LVPITEEGRH FYTLQEEPLE DPVNRLLKRG FDLAIALPVA VLVLPPLCVW
VALMQRLQAP GPLFHVRQRR GMRGNTFAML KFRSMYVDTG DEAAESRQAR PDDERIFPFG
RFLRRRSLDE FPQFWNVLRG EMSVVGPRPY MPMLDEEFRL QTKAYRTRHL VKPGITGLAQ
SMGYRGEILE KEMLSRRHSW DVHYITHWSF WLDLQISVRT LAQVLFPPKT AY
|
|---|
| |