| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3737 |
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| Symbol | |
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| ID | 6205970 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4862258 |
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| End bp | 4862896 |
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| Gene Length | 639 bp |
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| Protein Length | 212 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 641693404 |
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| Product | type II secretion pathway protein XcpT |
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| Protein accession | YP_001820612 |
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| Protein GI | 182415546 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4968] Tfp pilus assembly protein PilE |
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| TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGGAGT CCAGCTCGGC TGCCAGTAGC GGATGTGTTC GAACCACCTT GGGTCCGTGC
GGTGGGCGAC TGCGGCCGGA TCACGTGTGC GAGCATGGCT ATCCCGTGAA GCGGACGAAT
GGCCCTGGCG GTTTTACGCT GATCGAGTTG CTCGCGGTGC TGACAATCAT CGCGCTTTTG
GCGGCGATCG TGCTCGGCGC CGGGCGTCGC GTGAGCGAGT CCGGCCGCAT GGCCGAGGCG
CACGCGGAGC TCGCGGCGAT CGCGTCGGGG TTGGAATCCT ACTACAGCCA GTATGGCGAC
TATCCGCGGA CCGACGATGC GGGAGAGTTG CTGGAGGCGT TGCTCGGGTT GCGGGCGCCG
TCGGGCGCGG CGATCTCGGG GCGGGCGTTC ATCGACCGAG CCTGGTTTCG GACGGCGAAC
ACGACGGGAG CGGACGGGAC GGTGCGGCCA CAGCTGCTCG ACCCGTGGGA ACAAGGCTAC
GTTTACGTCT ATCGCGCGCC GGCCACGGTT CGGGCCCATT CGGACTACGT GCTCTATTCG
CGTGGACCGG ATCAGGCGCA CGAGCTCTCG CTGAACGCGG ACGGGTTTCC CAACACCACG
GCGCCGGCGA ACGCCGACAA CCTTTACGCG AGCCGATGA
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| Protein sequence | MPESSSAASS GCVRTTLGPC GGRLRPDHVC EHGYPVKRTN GPGGFTLIEL LAVLTIIALL
AAIVLGAGRR VSESGRMAEA HAELAAIASG LESYYSQYGD YPRTDDAGEL LEALLGLRAP
SGAAISGRAF IDRAWFRTAN TTGADGTVRP QLLDPWEQGY VYVYRAPATV RAHSDYVLYS
RGPDQAHELS LNADGFPNTT APANADNLYA SR
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