| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3718 |
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| Symbol | |
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| ID | 6204943 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4835209 |
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| End bp | 4836723 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 641693384 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001820593 |
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| Protein GI | 182415527 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.456589 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACGA ACGCTATCGG GCGGCTGATT GGCACCGGGC TGCTCTTGTG GGCGGCCACG
CTGCGCGCGG AGCCAATGCT CGCGTGGGGC GACCAGGGCG ATGGCACGTA TCGGAATCCG
ATCCTGCCGG CGGACTACTC CGACCCGGAC GTGATTCGCG TCGGAGACGA TTTTTATCTG
GTCGCGTCGG ATTTCCATTT CGTCGGGATG CAGGTGCTGC ATTCGCGCGA CTTAGTGAAC
TGGCGGATCA TCGGCCAGGT GTTCGACCGG CTGACGATGG ACGCCAGCTA CGACGAGATG
CGTGGCTACG CGCAGGGCAC GTGGGCGCCG TCGCTGCGGT TTCATGACGG CGTGTTCTAC
CTCTACGTCT GTACGCCGCA CGACGGGCTG TATCGATTTA CCGCGAAGGA TCCCGCTGGG
CCGTGGGAGA TGGTAACCGT CAAGACGGTG GATGCGTGGG AGGATCCGTG TCCGATCTGG
GACGATGACG GGCAGGCGTA TCTCGTCCAC AGCGTGCACG GCGCGGGACC GTTGATCCTG
CACAAGATGA ACCGCGAAGG CACGCAGCTG CTCGACGACG GCGTGGTGAT CTACCGCGGT
CCGGTGGCTG AGGGCCCGAA GTTTTACAAG CGAAACGGCT GGTATTACAT TTCGCTGCCG
GAGGGCGGCG TCGAGAAAGG CGGGCAGACC GTGCTGCGCG CGAAGAGCAT TTATGGTCCC
TACGAACGCC GCGAGGTGCT GCCGGCGGGC AGTCCGCACC AGGGTGGAAT CGTCGAACTC
GACAACGGCG AGTCGTGGTT CATCGCGTTC AAGTCCACCG GCCATCTCGG GCGCGTTGCG
CATCTGCTGC CCGTGAGATG GGGCGCGGAC GACTGGCCGG TGTTCGGCGA TCACGGGCAG
CCGGTGCCGG GCGGAAAGAA ACCCGGCGTG GGCGCGGGCG GGCCGATCCT GCATCCGCAG
ACGAGCGACG ATTTCGAGTC GGCCGCGCTT TCGCCGCAGT GGCAATGGAA TCACAATCCG
GTGCCCGCGG CATGGTCGCT CAGCGAGCGG CGCGGCTGGC TGCGGCTGCG GGGTCTGCCG
GCGCCGGAGC CAGTCGTGGC GCGCAACACG CTTACGCAAA AACTCTGGGG CGAGAGCGGG
ACGGTGACGG TGAAGCTCGA TCCGCGCGGG TTGAGCGAGG GCCAGGCGGC GGGGTTCGCG
TTCATGAGCG GACGCGTGTT CAACGCGGTC GGCGTGGCGC GGCTCGACGG GCGGTTGCGG
TTTTATTCGG AGACGGGACT CGGGCCGGTG ATCGGCGAGC AGGACGTCTG GCTGCGCGGC
ACCTACCACG GCGAACAAGC GCGGCTGTAT TTCAGCGCGG ACGGCGAGAC GTTCACCGAT
GTCGGTGCGA AGGTGGTGCT GCGGTTTGGG CAGTGGAAAG GCGCGCGCGT GACGCTGTTC
GCCTATGGAC CGGCCGCGGG CGCGGCGGAC TTCGACGAGT TTCAGTATCG ACACAGCGCG
AATCCAACTC GCTGA
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| Protein sequence | MKTNAIGRLI GTGLLLWAAT LRAEPMLAWG DQGDGTYRNP ILPADYSDPD VIRVGDDFYL
VASDFHFVGM QVLHSRDLVN WRIIGQVFDR LTMDASYDEM RGYAQGTWAP SLRFHDGVFY
LYVCTPHDGL YRFTAKDPAG PWEMVTVKTV DAWEDPCPIW DDDGQAYLVH SVHGAGPLIL
HKMNREGTQL LDDGVVIYRG PVAEGPKFYK RNGWYYISLP EGGVEKGGQT VLRAKSIYGP
YERREVLPAG SPHQGGIVEL DNGESWFIAF KSTGHLGRVA HLLPVRWGAD DWPVFGDHGQ
PVPGGKKPGV GAGGPILHPQ TSDDFESAAL SPQWQWNHNP VPAAWSLSER RGWLRLRGLP
APEPVVARNT LTQKLWGESG TVTVKLDPRG LSEGQAAGFA FMSGRVFNAV GVARLDGRLR
FYSETGLGPV IGEQDVWLRG TYHGEQARLY FSADGETFTD VGAKVVLRFG QWKGARVTLF
AYGPAAGAAD FDEFQYRHSA NPTR
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