Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3703 |
Symbol | |
ID | 6208059 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4811018 |
End bp | 4811989 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693369 |
Product | short-chain dehydrogenase/reductase SDR |
Protein accession | YP_001820578 |
Protein GI | 182415512 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0208567 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGGCCGCG CCGTGGCGCA ACGGTTCGCC CGCGAAGGGG CGTGGATCGG GCTGCTGGCC CGTGATCCGG CGCGGCTGGA GGATGCCAAA CGCGAGATCG AATCGCTCGG CGGCAAAGCC GTCATCCACG CGGGCGACGT GGCCGATCCG GCGGCGCACG AAGCCATCGC GGACTTGGTC GAACAAACCT TCGGGGCCAT CGACATCTGG ATCAACAACG CGATGACCTC CGTGTATTCA ATGATCCACG AGATGCCGCC CGAGGAGTTT CGGCGCGTGA CCGACGTGAC CTACCTCGGC GTGGTCTATG GCACGCAGTC GGCATTGCGG CGCATGCGCG CGCGCGATCG GGGCATGATC GTGCAGGTCG GATCCACGCT GGCGTATCGG AGCATTGCGT TTCAATCGGC GTATTGCGCG GCGAAACATG CCGTGCGCGG GTTTACCAAT TCACTCCGCT CGGAACTGAA GCATGACCGG CTGAAGATCG GTCTGACGAT GGTTCAGTTG CCCGCGGTGA ACACGCCGCA ATTCCTCTGG GCCCGGAACC GGCTGTCGCA AGCGGCGAAA CCACCGGCAC CGATCTACCA GCCAGAAGTC GCCGCGGAGG CGATCTGGTG GGCGGCGCAT CACCGACGGC GCGAAGTTTA TGTCGGCTAC AAGACGTCGC TCGGGATCAA GTTGAACAAA CTCATCCCGG CGTTTCTCGA CCGATTCCTG GGAAAGCGCT CATTTGGCGA AGCCCAGCGG ACGCGCGATC CGCGCCAGCC CGACAATCTG TGGCGGCCGG CGAAGGGACT CTATGCGGCG CGGGGGCCCT ACGTTGCCGA AGCGCAGTCC GGCTCGCTGC ATCTCACCAT TTCCAAGCAC CGCTCCGCCT GGCTGTGGGC GTTTGTCGGG ATGGCGAGTG CAGTGGCGTT TGCGTGGCGG CGCAAAAACC CGAGTCGCGG CCCGGTGTGG AACCGCCGAT AA
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Protein sequence | MGRAVAQRFA REGAWIGLLA RDPARLEDAK REIESLGGKA VIHAGDVADP AAHEAIADLV EQTFGAIDIW INNAMTSVYS MIHEMPPEEF RRVTDVTYLG VVYGTQSALR RMRARDRGMI VQVGSTLAYR SIAFQSAYCA AKHAVRGFTN SLRSELKHDR LKIGLTMVQL PAVNTPQFLW ARNRLSQAAK PPAPIYQPEV AAEAIWWAAH HRRREVYVGY KTSLGIKLNK LIPAFLDRFL GKRSFGEAQR TRDPRQPDNL WRPAKGLYAA RGPYVAEAQS GSLHLTISKH RSAWLWAFVG MASAVAFAWR RKNPSRGPVW NRR
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