| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3700 |
|---|
| Symbol | |
|---|
| ID | 6206911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4808422 |
|---|
| End bp | 4809318 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 641693366 |
|---|
| Product | endonuclease/exonuclease/phosphatase |
|---|
| Protein accession | YP_001820575 |
|---|
| Protein GI | 182415509 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG3568] Metal-dependent hydrolase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.0865051 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCGCCA CCCCTCGCCT CGACTTTCTC CTTCGCGCGC TCGCCGCGGC TGCGCTGTTC
TTTACGACGC TCAGCAGCCT GCGCGCCGCA TCGACTGATC GCACGACCGC GACCGCTCCG
CTCGCGCTGC GCGTGATGTC CTTCAACCTT CGCTTCGCCA GCCCGCAGCC GCCCCACGCC
TGGCCCGAGC GCCGGCCGAT CATGCAGCAC GTCATCGAGC AGACCGCGCC CGACCTCATC
GGCACGCAGG AAGGACTCTA TACCCAGCTC CGCGACCTGG CCGCCGATCT GCCCGCCTAC
GAGTGGATCG GGTTGGGCCG CGAGGGCGGC AGCCGGGGAG AATTCATGGC GGTGTTTTAT
CGACGCGAGC GGTTTGAGCC GGTCGCGTTC GATCACTTCT GGCTCTCCGA TACGCCCGAC
GTGATCGGTT CGATGACCTG GGGAAACAAT TACCGCCGAA TGGTGACGTG GGTGCGATTT
CGCGAGCGCG CCAGCGGCCG CGAGTTCTAT TTCTGGAACA CGCATTTCGA TCACGAGGTG
GAGACTGCCC GGCAGAAAGC CGCCATCCTG ATCCGCGATC GGCTCGCGCA GCTCGACGCA
TCCGTGCCGC TCCTGCTCGT CGGCGATTTC AACTGTGCCG CGGGAAACAG CCCCGCCTAC
GAAACGCTCA CCCGTGAAGC AGGTCTCACC GACACGTGGA CGGCGGCCAC GGCGCGGGTG
AACGAAGGGT TCAACACGTT TCACAATTAC GAGCCGCCGC GGCACGATGG CGTGCGCATC
GATTGGATCC TCGCCCGCAC GCCCTCCGCT GTGCCGCGCG CGGAAATCGT CACCTATCGC
GAAAACGGCC AGACCCCCAG CGATCATTTC CCGGTCCTGG CCGACGTACA GTTTTAG
|
|---|
| Protein sequence | MSATPRLDFL LRALAAAALF FTTLSSLRAA STDRTTATAP LALRVMSFNL RFASPQPPHA
WPERRPIMQH VIEQTAPDLI GTQEGLYTQL RDLAADLPAY EWIGLGREGG SRGEFMAVFY
RRERFEPVAF DHFWLSDTPD VIGSMTWGNN YRRMVTWVRF RERASGREFY FWNTHFDHEV
ETARQKAAIL IRDRLAQLDA SVPLLLVGDF NCAAGNSPAY ETLTREAGLT DTWTAATARV
NEGFNTFHNY EPPRHDGVRI DWILARTPSA VPRAEIVTYR ENGQTPSDHF PVLADVQF
|
|---|
| |