| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3664 |
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| Symbol | |
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| ID | 6204726 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | + |
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| Start bp | 4756889 |
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| End bp | 4758868 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 641693332 |
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| Product | malto-oligosyltrehalose trehalohydrolase |
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| Protein accession | YP_001820541 |
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| Protein GI | 182415475 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0296] 1,4-alpha-glucan branching enzyme |
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| TIGRFAM ID | [TIGR02402] malto-oligosyltrehalose trehalohydrolase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.186742 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.53005 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTTCCA AACGCAGCGC CGCGCCCTCG TCGCGCGCCT CCGCCCCAGC TCGCCCCGCC
CATGGGCAAG TGGATCCCGC CGGCGCGGAA GTTCGGCGCC GGTTTCCGAT CGGCGCCGAG
GTGCAGCCAG CCGGCGGCGT GCATTTTCGC GTGTGGGCGC CGAAGAGCCG CAGCGCCGCC
GTCGAGCTCG AGCGCGCCAC CGGCGCACCG GAGCGCGTGC CGCTGACGGC CGAATCGAGC
GGCTACTTCT CCGGGCTCGC GCCCACCGCC CGCGCTGGCA TGCGCTACCG GATCCACCTC
GACGCCGGCG CCTTTCCGGA TCCCGCCTCG CGGTTTCAAC CGGACGGCCC CCACGGCGCA
TCCGAGATTG TCGATCCCGA CGCCTTTCGC TGGACCGATC ACGGCTGGCG CGGTCGCAGC
TCGCGCGGGC TGGTGATCTA CGAATTGCAC CTCGGCACGT TCACGCCCGA GGGCACGTGG
CGCGCCGCCG CGGAACAGCT GTCCGCGCTG CGCCAGCTCG GAATCACCAC GCTCGAAGTG
ATGCCGATCG CCGAGTTCGC CGGCGCGTTC GGCTGGGGTT ACGACGGCGT CGATCTGTTC
GCGCCGACGC GGCTCTATGG CACGCCGGAC GACGCGCGTG CTTTTGTGAA CCGCGCGCAC
GAGCTTGGGC TCATGGTGAT TCTCGACGTC GTCTACAATC ACCTCGGCCC CGACGGCAAC
TACCTGACCC AGTTCGCCGC CGACTATCTT AGCCGCACGC GCCCGACCGA ATGGGGCGAG
TCGATCAACT TCGATGGCCC GAACTCCGGG CCCGTGCGCG AATTCTTCCT CACCAATGCG
CGCACCTGGA TCCAGGAATT TCACTTCGAT GGGCTGCGGC TCGACGCCAC GCAGCAGATC
TTCGACCGCT CCACACCCCA CTTCCTCACC GAGCTCGCAG CCGCCGCGCG CACGGCCGGC
GGCGGCCGTA TCACCTATCT GGTGGCAGAA AACGAGCCGC AGCATGCCTG GCTCGTCCGG
CCGGTCGAGT CGGGCGGCTG CGGGATGGAT GCGATCTGGA ATGACGACTT TCACCACACC
GCGCGGGTCG CCGCGACCGG TCACGCCGAG GCCTACTACT CCGATTACCA GGGCACCGCA
CGCGAGTTTG TCGGCGCGCT CAAGCGCGGC TTCCTGTTTC AGGGACAATG GTGCCGACGC
CAGCAAAAGT GCCGCGGCTC ACCTGCGCTG GATCTCGCGC CGGAGCAGTT CGTGGTGTTT
CTGCAGAATC ACGACCAGGT CGCCAATTCG CTGCGCGGCG AGCGGCTGCA CCAGCTCGCC
AGCCCGGGCG TGACGCGTGC GCTGACGGCG GTGCTGCTGC TCGGACCGCA GACGCCGCTG
CTGTTTCAAG GGCAGGAGTT CGGCGCCTCG GCCCCGTTTC TCTATTTCGC CGATCACTCC
CCCGAGCTGC GCCGGCGGGT GAGTGAAGGC CGGCGCCAAT TCCTCGGGCA GTTTCCGACG
ATCGCGAGCA GCGAGTGCCA CTCGCTGCTC GCCGAGCCCG CCGAGCGCGA AACGTTCCTG
CGTGCGAAGC TCGATTGGGC CGAGCGCGAA CGCCACGCCG CCAGCTACCG GTTGCACGCG
GACCTGCTCC GGCTGCGCCG CGAAGATGCC ACGCTCGCCG CGCCGGATGA TTTCGACGCC
GCCGTGCTCG ATCGCGACGC GTTCGTCTAC CGTTGTTTCT CGGCGCGGGG GGCCGACCGG
CTGCTGATCG TCAACCTCGG TCGCGAACTC CGGTTCACCA CCGCCGAGCC ACTGCTGGCT
CCGACCGAGG GCCACGGCTG GGACGTGCTC TGGTCCAGCG AGGCTCCGCT TTACGACGGC
AACGGCACGC CGCCGCTGGA GTCCGGCGAC GGTTGGACCA TCCCAGGCTG CACGGCGGTC
CTGTTGCAAC CGGGCGCGCC GCGCGATTTC TCAATCTCCG CTTCCGATGC GCACGATTGA
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| Protein sequence | MPSKRSAAPS SRASAPARPA HGQVDPAGAE VRRRFPIGAE VQPAGGVHFR VWAPKSRSAA
VELERATGAP ERVPLTAESS GYFSGLAPTA RAGMRYRIHL DAGAFPDPAS RFQPDGPHGA
SEIVDPDAFR WTDHGWRGRS SRGLVIYELH LGTFTPEGTW RAAAEQLSAL RQLGITTLEV
MPIAEFAGAF GWGYDGVDLF APTRLYGTPD DARAFVNRAH ELGLMVILDV VYNHLGPDGN
YLTQFAADYL SRTRPTEWGE SINFDGPNSG PVREFFLTNA RTWIQEFHFD GLRLDATQQI
FDRSTPHFLT ELAAAARTAG GGRITYLVAE NEPQHAWLVR PVESGGCGMD AIWNDDFHHT
ARVAATGHAE AYYSDYQGTA REFVGALKRG FLFQGQWCRR QQKCRGSPAL DLAPEQFVVF
LQNHDQVANS LRGERLHQLA SPGVTRALTA VLLLGPQTPL LFQGQEFGAS APFLYFADHS
PELRRRVSEG RRQFLGQFPT IASSECHSLL AEPAERETFL RAKLDWAERE RHAASYRLHA
DLLRLRREDA TLAAPDDFDA AVLDRDAFVY RCFSARGADR LLIVNLGREL RFTTAEPLLA
PTEGHGWDVL WSSEAPLYDG NGTPPLESGD GWTIPGCTAV LLQPGAPRDF SISASDAHD
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