Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3662 |
Symbol | |
ID | 6208265 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4753227 |
End bp | 4754582 |
Gene Length | 1356 bp |
Protein Length | 451 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 641693330 |
Product | glycoside hydrolase family protein |
Protein accession | YP_001820539 |
Protein GI | 182415473 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG3693] Beta-1,4-xylanase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.132636 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.859273 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACCT TGCTGCGTGT TCTTCTTTTA GGGTTCAGCT GGCTCGGCGC GGTCGCGGGG GCGGCGCGCG CCGATTCCGA TGCGGTGGAG GCGCTGCTGG CGCGTGCCAA CCAAAACATC GAGCAACAGC GGAAGGGAGA TATCCAAATC CGCGTGACAG ACGCCGCCGG CCGGCCGCAG GCCGGAGTCA CGGTGACGGT GGACCAGCGC ACGCATCATT TCCGGTTCGG CTCGATCGCG TTCGAGTTGC TGCCGGCGAA CCACTTCACG CCGGAGCAGG AGGCGGTGTT CAAGCAGCGG TTCACGCAGC TCTTCAATCT GGCGATTCTG CCGTTCTACT GGGACGGCTA CGAACCGGTG CCGGGACGCC CGGGCTGGGA GCGGATGCTC GAGGTGGCGA CTTGGTGCAA GGCCCACGGC ATCACGCCGA AGGGGCACCC GCTGGCGTGG ACGCACGTGG CGGGCACGCC GGCCTGGCTG TCCGAGCTGC CGCCGGATTG CAGCCGGTCG CTGCTGCAAG CGCGCGTGGT CGAAAATGTG AAAGGCTTTG CGGGGACGAT CGACCTGTGG GACGTCGCGA ACGAAGCGGC CAACACGGTG GTATGGGACG CAGCGATGAA AATGCCGGAG CGGATCGAGG GGGAGCGCTA CCCGGCGGCG GGGCCGTCCA TTGCGGAAGT CGCCGACTGG ATCGAGCCCT GCTACCGCTG GGCTCACGCC GCGAACCCGG ACGCGACGTT GCTCCTGAAC GATTTTGGCC AGATCGCGTG GCCGCCGGTC CGCGAGCGAT TCTTCGCGTT GGTCAAGGAA CTGCAGCGAC GCGGCACGCC GCTGCACGGC ATCGGGCTGC AGGCCCACGA GCCGCGCACC GAATGGTTTC ATCCGCAGAA GGTCTGGGAC ACGCTGGAGC GTTGTCGCGA GCTCGGGCTG CCGATTCATT TCACGGAGTT TCATCCGCAC TCGCTCGGCG CGCCGATTTC CGGCGGCTAC AAGGAAGGCG TCTGGTCGGA GGAGAATCAG GCTGAGTTCG CCCGGATCAT GTATACGCTC GGGTTCGGCC ACCCATCGGT GGTCTCGTTC ACGTGGTGGG ATTTCACCGA GAACGATTCC TACATCAAAG GCAGCGCGCT GCTACGAAAA GATCTGACGC CGAAGCCCGC CTACGAAGTC CTGGATCAGC TGATCAATCA CGCGTGGAAA ACGCACGCCA CGCTCAAGAC TGATGCGGAC GGTCGGATTG CGCTGCGGGG GTTTTATGGC GAGTACCAGG TGCGGCCGGA GGCAGGCGCG ACAGGGCCGG TCACGTTCCA GCACGTTCCC GGAGCGGCCA GCGAGTGGAC GGTGCGGCTG CAATGA
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Protein sequence | MKTLLRVLLL GFSWLGAVAG AARADSDAVE ALLARANQNI EQQRKGDIQI RVTDAAGRPQ AGVTVTVDQR THHFRFGSIA FELLPANHFT PEQEAVFKQR FTQLFNLAIL PFYWDGYEPV PGRPGWERML EVATWCKAHG ITPKGHPLAW THVAGTPAWL SELPPDCSRS LLQARVVENV KGFAGTIDLW DVANEAANTV VWDAAMKMPE RIEGERYPAA GPSIAEVADW IEPCYRWAHA ANPDATLLLN DFGQIAWPPV RERFFALVKE LQRRGTPLHG IGLQAHEPRT EWFHPQKVWD TLERCRELGL PIHFTEFHPH SLGAPISGGY KEGVWSEENQ AEFARIMYTL GFGHPSVVSF TWWDFTENDS YIKGSALLRK DLTPKPAYEV LDQLINHAWK THATLKTDAD GRIALRGFYG EYQVRPEAGA TGPVTFQHVP GAASEWTVRL Q
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