| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3662 |
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| Symbol | |
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| ID | 6208265 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Opitutus terrae PB90-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010571 |
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| Strand | - |
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| Start bp | 4753227 |
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| End bp | 4754582 |
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| Gene Length | 1356 bp |
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| Protein Length | 451 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 641693330 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001820539 |
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| Protein GI | 182415473 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3693] Beta-1,4-xylanase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.132636 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.859273 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCT TGCTGCGTGT TCTTCTTTTA GGGTTCAGCT GGCTCGGCGC GGTCGCGGGG
GCGGCGCGCG CCGATTCCGA TGCGGTGGAG GCGCTGCTGG CGCGTGCCAA CCAAAACATC
GAGCAACAGC GGAAGGGAGA TATCCAAATC CGCGTGACAG ACGCCGCCGG CCGGCCGCAG
GCCGGAGTCA CGGTGACGGT GGACCAGCGC ACGCATCATT TCCGGTTCGG CTCGATCGCG
TTCGAGTTGC TGCCGGCGAA CCACTTCACG CCGGAGCAGG AGGCGGTGTT CAAGCAGCGG
TTCACGCAGC TCTTCAATCT GGCGATTCTG CCGTTCTACT GGGACGGCTA CGAACCGGTG
CCGGGACGCC CGGGCTGGGA GCGGATGCTC GAGGTGGCGA CTTGGTGCAA GGCCCACGGC
ATCACGCCGA AGGGGCACCC GCTGGCGTGG ACGCACGTGG CGGGCACGCC GGCCTGGCTG
TCCGAGCTGC CGCCGGATTG CAGCCGGTCG CTGCTGCAAG CGCGCGTGGT CGAAAATGTG
AAAGGCTTTG CGGGGACGAT CGACCTGTGG GACGTCGCGA ACGAAGCGGC CAACACGGTG
GTATGGGACG CAGCGATGAA AATGCCGGAG CGGATCGAGG GGGAGCGCTA CCCGGCGGCG
GGGCCGTCCA TTGCGGAAGT CGCCGACTGG ATCGAGCCCT GCTACCGCTG GGCTCACGCC
GCGAACCCGG ACGCGACGTT GCTCCTGAAC GATTTTGGCC AGATCGCGTG GCCGCCGGTC
CGCGAGCGAT TCTTCGCGTT GGTCAAGGAA CTGCAGCGAC GCGGCACGCC GCTGCACGGC
ATCGGGCTGC AGGCCCACGA GCCGCGCACC GAATGGTTTC ATCCGCAGAA GGTCTGGGAC
ACGCTGGAGC GTTGTCGCGA GCTCGGGCTG CCGATTCATT TCACGGAGTT TCATCCGCAC
TCGCTCGGCG CGCCGATTTC CGGCGGCTAC AAGGAAGGCG TCTGGTCGGA GGAGAATCAG
GCTGAGTTCG CCCGGATCAT GTATACGCTC GGGTTCGGCC ACCCATCGGT GGTCTCGTTC
ACGTGGTGGG ATTTCACCGA GAACGATTCC TACATCAAAG GCAGCGCGCT GCTACGAAAA
GATCTGACGC CGAAGCCCGC CTACGAAGTC CTGGATCAGC TGATCAATCA CGCGTGGAAA
ACGCACGCCA CGCTCAAGAC TGATGCGGAC GGTCGGATTG CGCTGCGGGG GTTTTATGGC
GAGTACCAGG TGCGGCCGGA GGCAGGCGCG ACAGGGCCGG TCACGTTCCA GCACGTTCCC
GGAGCGGCCA GCGAGTGGAC GGTGCGGCTG CAATGA
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| Protein sequence | MKTLLRVLLL GFSWLGAVAG AARADSDAVE ALLARANQNI EQQRKGDIQI RVTDAAGRPQ
AGVTVTVDQR THHFRFGSIA FELLPANHFT PEQEAVFKQR FTQLFNLAIL PFYWDGYEPV
PGRPGWERML EVATWCKAHG ITPKGHPLAW THVAGTPAWL SELPPDCSRS LLQARVVENV
KGFAGTIDLW DVANEAANTV VWDAAMKMPE RIEGERYPAA GPSIAEVADW IEPCYRWAHA
ANPDATLLLN DFGQIAWPPV RERFFALVKE LQRRGTPLHG IGLQAHEPRT EWFHPQKVWD
TLERCRELGL PIHFTEFHPH SLGAPISGGY KEGVWSEENQ AEFARIMYTL GFGHPSVVSF
TWWDFTENDS YIKGSALLRK DLTPKPAYEV LDQLINHAWK THATLKTDAD GRIALRGFYG
EYQVRPEAGA TGPVTFQHVP GAASEWTVRL Q
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