Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Oter_3627 |
Symbol | |
ID | 6208668 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Opitutus terrae PB90-1 |
Kingdom | Bacteria |
Replicon accession | NC_010571 |
Strand | - |
Start bp | 4716270 |
End bp | 4717799 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 641693295 |
Product | hypothetical protein |
Protein accession | YP_001820504 |
Protein GI | 182415438 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.755781 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCTCCCA CTCCAGCGCA TATCCCCGCG TGGCTGCTCG TGCTCGGAAC GGTGATGACG GTGCCGCTGG CCCATGCCGC GGGGGCGCCG GCAGGAGATT TTCCGCTGCC GCTCGACGCT TATCCCGGCG CCGCCGACGG CGTCTGGGCC ACGCTGCGCG AGCGCGCGCG TATCGAGCCT TTCAATCTGG TTGCGACGGG CATCTTCCTG CTCGCGATCA TCCACACCTT TCTGACGGCG AAGTTCCGGC ACTGGGCGCA CGAAGTCGAA GCCGCGCACT GCGCGCGGTT GAAGGAGCGC GCCGCACCCG CAACCGATAC TGACGAGGAT GACGTGCCGG ACGAAGTGAG CTTCAAAGGC CAGATCCTGC ATTTTCTCGG CGAGGTGGAG GCCGTGTTCG GCACGTGGGT CGTGGTGCTG ATCGGTGCGA TCGTGTGGTT CAAAGGCTGG CCGACGGTGG TGGATTACGT TGGGCAGCGG GTGACGTTCA CCGAACCGAT GTTCGTCGTC GTGATCATGG CGCTCGCTTC GACCCGCCCG GTGCTGACGG TCGCGGAGCA ATGCCTGCGC GCCGTGGCGT CGATCGGCCG CGGTTCCGCG GCGGCGTGGT GGCTGGCCAT CCTGATCATC GCGCCCGTGC TGGGTTCGTT TATCACGGAG CCGGCGGCGA TGACGATCGC CGCGCTGCTG CTCGCGCGGC AGTTCTACCA ACTCGAGCCC TCGCTGCGGC TGCGCTATGC CACGATCGGG CTGTTGTTCG TGAATGTCTC GGTGGGTGGG ACCCTGACGC ATTTCGCCGC GCCACCGGTG CTGATGGTGG CGGCGCCGTG GGGCTGGGAC ACGCCCTTCA TGATGCTACA TTTTGGCTGG AAGGCGCTCG TGGGCATCCT TGTGGCGACG CTGGCGTATT ACGCCGCGTT CCGCCATGAA TTCAAAACGC TCGAGCTGGT GCGCAGCCGG CTGGCCGAGG GCGGGGAGAA CGCCGCGAAC GCCCGGCCGC CGATTCCGGC CTGGATCACC GTGGTGCAAC TCGGGTTTCT CGCGCTGACG GTATTTGTCG CGCATTACCC GGCGCTGTTC ATCGGCGGGT TTCTCTTCTT CCTGGCGTTC GCACAGGCCA CGGCGCATCA CCAAAGCCGG CTGGATCTGC GGGCGCCGCT GCTGGTCGGA TTTTTCCTCG CGGGTCTCGT GATCCACGGC GGACTGCAGG CGTGGTGGAT CCAGCCCGTA TTGAGCAGCC TGACCGAGCT GCCGCTGTTC CTCGGGGCGA CGGCGCTCAC CGCGGTGAAC GACAATGCGG CCATCACGTA TCTCGCGACC CTCGTGCCGG GATTTACCGA ACCGTTGAAA TACGCCGTCG TCGCCGGCGC GGTGACTGGC GGCGGGCTCA CGGTGATCGC CAATGCGCCG AATCCTGCCG GCCAGACGAT CCTGCAACGG TATTTCCCGG ACGGCGTTTC GCCGCTTGGC CTGCTGTTGG GTGCGCTCGC GCCGACGGTG ATCATGGCGC TGGCGTTCCT GCTGCTGTAG
|
Protein sequence | MAPTPAHIPA WLLVLGTVMT VPLAHAAGAP AGDFPLPLDA YPGAADGVWA TLRERARIEP FNLVATGIFL LAIIHTFLTA KFRHWAHEVE AAHCARLKER AAPATDTDED DVPDEVSFKG QILHFLGEVE AVFGTWVVVL IGAIVWFKGW PTVVDYVGQR VTFTEPMFVV VIMALASTRP VLTVAEQCLR AVASIGRGSA AAWWLAILII APVLGSFITE PAAMTIAALL LARQFYQLEP SLRLRYATIG LLFVNVSVGG TLTHFAAPPV LMVAAPWGWD TPFMMLHFGW KALVGILVAT LAYYAAFRHE FKTLELVRSR LAEGGENAAN ARPPIPAWIT VVQLGFLALT VFVAHYPALF IGGFLFFLAF AQATAHHQSR LDLRAPLLVG FFLAGLVIHG GLQAWWIQPV LSSLTELPLF LGATALTAVN DNAAITYLAT LVPGFTEPLK YAVVAGAVTG GGLTVIANAP NPAGQTILQR YFPDGVSPLG LLLGALAPTV IMALAFLLL
|
| |