| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3619 |
|---|
| Symbol | |
|---|
| ID | 6204498 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4704511 |
|---|
| End bp | 4705785 |
|---|
| Gene Length | 1275 bp |
|---|
| Protein Length | 424 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641693287 |
|---|
| Product | Glu/Leu/Phe/Val dehydrogenase |
|---|
| Protein accession | YP_001820496 |
|---|
| Protein GI | 182415430 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0334] Glutamate dehydrogenase/leucine dehydrogenase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.0770493 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCAAGG TCATCATCTC GACGCTGTAC GACTCAGACG TTTTCAAGAT GGCTTGCCGC
CAGTTCGACA AGGCTGCCGA CGCCATCAAC CTCCCCGAAA ATCTCCGCGA TCGGACGAAA
TACCCCAAGC GGTGCCTCGC GGTCGCGCTG CCGATTCGTC GCGATGACGG CAGCATCAGC
GTGTTCGAGG GCTACCGGGT GCAGCACAAT CTCTCGACCG GCCCATCGAA GGGCGGCATC
CGTTACCACC AGAACGTCAC GATCGGCGAG GTCGCCGCGC TCGCGATGTG GATGAGTTGG
AAATGTTCGC TGGTCGGCCT GCCCTACGGC GGCGCCAAGG GCGGCGTCGT GGTCGACCCA
CGCGAGCTTT CCGACGGGGA ACTCGAGCGG CTGTCGCGCC GCTACATGCA GGAGATGGTG
AATTTTCTCG GGCCCCACGT CGACGTACCC GCGCCGGACG TCGGCACCAA CGAGCGCGTG
ATGGCGTGGA TGATGGACAC CTATTCGAAC CACGTCGGCC ACATCGAGCC GTCGATCGTG
ACGGGCAAGC CCATTTCCGT CGGCGGGTCC CAAGGCCGGC GCGAAGCCAC TGGCGCCGGC
GTCGCCTATC TTGCGACGCG TTATCTCGAA GATCTCGGCC TTTCGCCCGC TTCCTCCACC
GTGGCCGTGC AAGGCTTCGG CAACGTCGGC AGCGAAGCGG CCCTCGCCTT CGAAAATTAC
GGGGTGAAGG TCATCGCACT CTCCGACTAC ACCGGCGGCG TCTACAATCC GAACGGCATC
AACGTCCGCA AGGCCGTCGC CTATGTTCGC TCGCAAAAGG TGCTGCGCGA TCTGCCTGAC
GCCGAACCGA TCACCAACGA ACAATTGCTC GAGTTGCCGT GCACCGTTCT CGCGCCGTGC
GCGCTCGAAC GCGTCATCAC CGAGGCCAAT GCGTCCAAGC TCCGCTGCCG CGTGCTCGCC
GAAGGCGCCA ACGGACCGAC CACCAACTCC GCCGATCGGA TCATCGACGA ACGCGGCGAC
ATCGAGCTAA TCCCCGACGT GCTCTGCAAT TCGGGCGGCG TGGTCGTTTC CTACTTCGAG
TGGATTCAGA ATCTGCAGAA CTATTATTGG GATCGCGACG AGGTGATGAA GAAGCTGTAT
GCGATCCTCG ACAAGGCGCG CGAGTCGGTG GAATACCAGA AACGAAAGCT CAAGTTCAGC
CGACGGCTCG CGGCGTTGAC GCTCGGCATC CAGCGCGTCG CCGACGCGAA AGCTGCGCGC
GGTCTGTTCC CGTAA
|
|---|
| Protein sequence | MSKVIISTLY DSDVFKMACR QFDKAADAIN LPENLRDRTK YPKRCLAVAL PIRRDDGSIS
VFEGYRVQHN LSTGPSKGGI RYHQNVTIGE VAALAMWMSW KCSLVGLPYG GAKGGVVVDP
RELSDGELER LSRRYMQEMV NFLGPHVDVP APDVGTNERV MAWMMDTYSN HVGHIEPSIV
TGKPISVGGS QGRREATGAG VAYLATRYLE DLGLSPASST VAVQGFGNVG SEAALAFENY
GVKVIALSDY TGGVYNPNGI NVRKAVAYVR SQKVLRDLPD AEPITNEQLL ELPCTVLAPC
ALERVITEAN ASKLRCRVLA EGANGPTTNS ADRIIDERGD IELIPDVLCN SGGVVVSYFE
WIQNLQNYYW DRDEVMKKLY AILDKARESV EYQKRKLKFS RRLAALTLGI QRVADAKAAR
GLFP
|
|---|
| |