| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Oter_3611 |
|---|
| Symbol | |
|---|
| ID | 6204821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Opitutus terrae PB90-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010571 |
|---|
| Strand | + |
|---|
| Start bp | 4691679 |
|---|
| End bp | 4693118 |
|---|
| Gene Length | 1440 bp |
|---|
| Protein Length | 479 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 641693279 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001820488 |
|---|
| Protein GI | 182415422 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAACGC GCGTGTCTGC CATCGTTGCC ATCGCGTTGC TTACCGTCAG CGCGACTTCG
TGTTCGAGCT CGGGCAGCCG CAGAGGAGTG ATGCGGGATG GTGACGCCGC CGTGGTGACG
ATCGCCCGCG CCGGGGGCAC GCCGATCTCT CCCTTCGCCT TCGGCAATAA CTATTTCAAC
TGGGTCGACT GGAACAAGGA CGGCATGGTG GGGCTGCGGG GGACCGAAGA CCCGGTCAAG
GCGCTCCGGC TGAACGTGGT GGTCGGCGAC AACAACCAGA ACGACGCCAA CGCCCCGCAG
CTCTTCGATC ACGCGCAGAT CGACAGCTAC ATCCAATACT GCCGCGCAGT CGGGGCCGAG
CCGATCATGA TCGCACCGGT GTACGGCAAC AACGTCGATG GCGGGCCGAC TTCGGCGCAA
GGCGCGGCGG ACATCGTCAC CTACGTCAAC GGCACCAAAA ACTACGGCGT CAAGTACTGG
ACCATCGGCA TGGAGGTGGA CATCTACGAT CAGTTTTTCA AGCGGACGAC AGGTCTGCCC
GTTTCGACTG CGGAGGAGTA CGCGGCCGTC TTCAATTCCT ACGCCAAGGC GATGAAGGCC
GCCAACGCGG CGGCACATAG CGGCGTCGAG CTCGTGTTCG TCGGGCCCGA GCTCGGTTGG
AGATACTCGG AGGGCAACGA CTGGCTCAGC CCGATGCTCG ACCACTGCAG GGACACGATC
GGCATCGCGA GCATCCATGC CTACGGGTTC GCGGCCAAGG ACCTCACCGT CGAGCGCATC
CTCACCGATG TCGATCGGTT CCGGCCATTC GTGCAGGACC TGAAAGTCCG CGTCGCCCGG
CACGCCCGCC CCGGCACTCC CCTGGCGATC ACGGAAGCGA ACATTTGCTA CGAATGGGAT
CCCAAGGCCT ATACGGCGGA GACGAGAAAG CTGGGTCCCG GGACCTTCTA TGCTGCGCTC
TGGGACGCGG ACCGGATGGG CGCAGCGCTC GAGGCCGACC TCTGGGCGTT CGCGTTCTGG
GACCTGGCCG AATCCGATCA GTTGCTCGCG TCGGACAGCA CCGTCTTTGG GTTCATTCGG
ACGGATCCAT CGAAGAACCC ACCGACCTGG ACACTGACGC CCGAATACCA CGCCCAGCAG
ATGGTCACCA CCAACTTCAG CGGGAACACC GTTGTGCCTA CCGGAGTTCC TAAGCGCATG
TCGGTTTACG CAAGCTACGA CGGCAGGAAA GCCGCCACCG CCGTGCTCGT CGTCAACAAG
GACACGGCGG AGAGAGTTGT GACGCTCGCG ATCGACGATC TTCCTCCCAG GACAATCACG
TACTCCCCGA TGTCCATCAA TCTCGTCACC ATCCCGGACG CTCCCGCCGC TGATCACCAC
GTTTTGGAGT ACACTATGGA GATGGCAGAT GCCGGCCTGC CACCCAAGGC CACTCGCTGA
|
|---|
| Protein sequence | MKTRVSAIVA IALLTVSATS CSSSGSRRGV MRDGDAAVVT IARAGGTPIS PFAFGNNYFN
WVDWNKDGMV GLRGTEDPVK ALRLNVVVGD NNQNDANAPQ LFDHAQIDSY IQYCRAVGAE
PIMIAPVYGN NVDGGPTSAQ GAADIVTYVN GTKNYGVKYW TIGMEVDIYD QFFKRTTGLP
VSTAEEYAAV FNSYAKAMKA ANAAAHSGVE LVFVGPELGW RYSEGNDWLS PMLDHCRDTI
GIASIHAYGF AAKDLTVERI LTDVDRFRPF VQDLKVRVAR HARPGTPLAI TEANICYEWD
PKAYTAETRK LGPGTFYAAL WDADRMGAAL EADLWAFAFW DLAESDQLLA SDSTVFGFIR
TDPSKNPPTW TLTPEYHAQQ MVTTNFSGNT VVPTGVPKRM SVYASYDGRK AATAVLVVNK
DTAERVVTLA IDDLPPRTIT YSPMSINLVT IPDAPAADHH VLEYTMEMAD AGLPPKATR
|
|---|
| |